Protein–RNA interactions for Protein: Q53EP0

FNDC3B, Fibronectin type III domain-containing protein 3B, humanhuman

Known RBP Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3BQ53EP0 AP003049.1-201ENST00000529418 457 ntBASIC8.12□□□□□ -1.11
FNDC3BQ53EP0 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC8.12□□□□□ -1.11
FNDC3BQ53EP0 AC012414.2-201ENST00000559474 187 ntBASIC8.12□□□□□ -1.11
FNDC3BQ53EP0 LINC02544-201ENST00000564830 544 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
FNDC3BQ53EP0 MT1L-202ENST00000566367 78 ntBASIC8.12□□□□□ -1.11
FNDC3BQ53EP0 AC024267.3-201ENST00000579673 562 ntTSL 5 BASIC8.12□□□□□ -1.11
FNDC3BQ53EP0 AC011472.3-201ENST00000586051 906 ntTSL 3 BASIC8.12□□□□□ -1.11
FNDC3BQ53EP0 AC073911.1-201ENST00000592296 504 ntTSL 5 BASIC8.12□□□□□ -1.11
FNDC3BQ53EP0 AL049840.6-202ENST00000603373 279 ntBASIC8.12□□□□□ -1.11
FNDC3BQ53EP0 AL109918.2-201ENST00000605188 279 ntBASIC8.12□□□□□ -1.11
FNDC3BQ53EP0 AC084824.5-201ENST00000612009 413 ntBASIC8.12□□□□□ -1.11
FNDC3BQ53EP0 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC8.12□□□□□ -1.11
FNDC3BQ53EP0 LZTS1-204ENST00000616228 231 ntTSL 2 BASIC8.12□□□□□ -1.11
FNDC3BQ53EP0 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC8.12□□□□□ -1.11
FNDC3BQ53EP0 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC8.12□□□□□ -1.11
FNDC3BQ53EP0 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
FNDC3BQ53EP0 SUPT16H-201ENST00000216297 4684 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
FNDC3BQ53EP0 AL049646.1-201ENST00000457009 2490 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
FNDC3BQ53EP0 BEND2-202ENST00000380033 4611 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
FNDC3BQ53EP0 FCGR3B-202ENST00000367964 2143 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
FNDC3BQ53EP0 RBM46-202ENST00000510397 3626 ntTSL 2 BASIC8.12□□□□□ -1.11
FNDC3BQ53EP0 HMCN2-206ENST00000624552 15610 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
FNDC3BQ53EP0 ASB15-206ENST00000451558 4788 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
FNDC3BQ53EP0 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC8.12□□□□□ -1.11
FNDC3BQ53EP0 SNTG1-207ENST00000522124 3504 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
FNDC3BQ53EP0 AMPH-202ENST00000356264 3418 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
FNDC3BQ53EP0 A1CF-201ENST00000282641 9350 ntAPPRIS ALT1 TSL 2 BASIC8.12□□□□□ -1.11
FNDC3BQ53EP0 AC009090.4-201ENST00000623921 3691 ntBASIC8.11□□□□□ -1.11
FNDC3BQ53EP0 AC068044.1-201ENST00000441585 1978 ntBASIC8.11□□□□□ -1.11
FNDC3BQ53EP0 GALNT15-206ENST00000617544 2775 ntTSL 5 BASIC8.11□□□□□ -1.11
FNDC3BQ53EP0 SLC11A2-202ENST00000262052 4132 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
FNDC3BQ53EP0 ZC3H14-203ENST00000318308 1384 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
FNDC3BQ53EP0 BRD7P1-201ENST00000557705 1915 ntBASIC8.11□□□□□ -1.11
FNDC3BQ53EP0 AC073349.2-201ENST00000427545 1603 ntBASIC8.11□□□□□ -1.11
FNDC3BQ53EP0 MYRFL-203ENST00000547771 3465 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
FNDC3BQ53EP0 ZMYND8-212ENST00000458360 3729 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
FNDC3BQ53EP0 NEK10-201ENST00000295720 2871 ntTSL 2 BASIC8.11□□□□□ -1.11
FNDC3BQ53EP0 NLGN4X-201ENST00000275857 5454 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
FNDC3BQ53EP0 AC093616.1-201ENST00000427434 2095 ntBASIC8.11□□□□□ -1.11
FNDC3BQ53EP0 AFF1-211ENST00000544085 3644 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
FNDC3BQ53EP0 KEL-201ENST00000355265 2812 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
FNDC3BQ53EP0 MIR137HG-205ENST00000634594 3586 ntTSL 5 BASIC8.11□□□□□ -1.11
FNDC3BQ53EP0 TTC9C-202ENST00000316461 1080 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
FNDC3BQ53EP0 RNA5SP378-201ENST00000363646 120 ntBASIC8.11□□□□□ -1.11
FNDC3BQ53EP0 HBS1L-202ENST00000367820 638 ntTSL 3 BASIC8.11□□□□□ -1.11
FNDC3BQ53EP0 GPX2-201ENST00000389614 990 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
FNDC3BQ53EP0 TRAV35-201ENST00000390462 330 ntBASIC8.11□□□□□ -1.11
FNDC3BQ53EP0 AL035698.1-201ENST00000405812 564 ntBASIC8.11□□□□□ -1.11
FNDC3BQ53EP0 AC011753.4-201ENST00000417974 311 ntBASIC8.11□□□□□ -1.11
FNDC3BQ53EP0 UBTFL7-201ENST00000418789 1191 ntBASIC8.11□□□□□ -1.11
FNDC3BQ53EP0 AC016877.1-201ENST00000420417 464 ntTSL 3 BASIC8.11□□□□□ -1.11
FNDC3BQ53EP0 MTND4LP7-201ENST00000431728 294 ntBASIC8.11□□□□□ -1.11
FNDC3BQ53EP0 SLC25A24P1-202ENST00000434803 1220 ntBASIC8.11□□□□□ -1.11
FNDC3BQ53EP0 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
FNDC3BQ53EP0 AC002553.1-201ENST00000442828 802 ntBASIC8.11□□□□□ -1.11
FNDC3BQ53EP0 ARL2BPP7-201ENST00000446421 490 ntBASIC8.11□□□□□ -1.11
FNDC3BQ53EP0 ZNF736P6Y-201ENST00000447526 1213 ntBASIC8.11□□□□□ -1.11
FNDC3BQ53EP0 PROX1-AS1-203ENST00000451396 476 ntTSL 5 BASIC8.11□□□□□ -1.11
FNDC3BQ53EP0 C1DP3-201ENST00000455013 423 ntBASIC8.11□□□□□ -1.11
FNDC3BQ53EP0 AC078788.2-201ENST00000462300 382 ntTSL 3 BASIC8.11□□□□□ -1.11
FNDC3BQ53EP0 AC114300.1-201ENST00000502347 280 ntBASIC8.11□□□□□ -1.11
FNDC3BQ53EP0 AC114956.3-202ENST00000505645 482 ntTSL 5 BASIC8.11□□□□□ -1.11
FNDC3BQ53EP0 AC004817.1-201ENST00000553621 721 ntTSL 4 BASIC8.11□□□□□ -1.11
FNDC3BQ53EP0 TGFB3-AS1-201ENST00000553732 580 ntTSL 4 BASIC8.11□□□□□ -1.11
FNDC3BQ53EP0 OR1P1-201ENST00000571766 994 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
FNDC3BQ53EP0 PRR13P4-201ENST00000577786 421 ntBASIC8.11□□□□□ -1.11
FNDC3BQ53EP0 MIR3680-2-201ENST00000578247 87 ntBASIC8.11□□□□□ -1.11
FNDC3BQ53EP0 MIR3680-1-201ENST00000581433 87 ntBASIC8.11□□□□□ -1.11
FNDC3BQ53EP0 NDUFA3P1-201ENST00000588007 252 ntBASIC8.11□□□□□ -1.11
FNDC3BQ53EP0 LINC01198-208ENST00000599175 560 ntTSL 5 BASIC8.11□□□□□ -1.11
FNDC3BQ53EP0 BNIP3P27-201ENST00000599991 412 ntBASIC8.11□□□□□ -1.11
FNDC3BQ53EP0 AC113554.1-201ENST00000606284 490 ntBASIC8.11□□□□□ -1.11
FNDC3BQ53EP0 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC8.11□□□□□ -1.11
FNDC3BQ53EP0 REST-209ENST00000622863 1106 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
FNDC3BQ53EP0 C18orf12-201ENST00000623329 537 ntBASIC8.11□□□□□ -1.11
FNDC3BQ53EP0 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC8.11□□□□□ -1.11
FNDC3BQ53EP0 TOM1L1-203ENST00000536554 1522 ntTSL 2 BASIC8.11□□□□□ -1.11
FNDC3BQ53EP0 LINC01568-201ENST00000554640 2544 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
FNDC3BQ53EP0 LIMCH1-219ENST00000514096 3543 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
FNDC3BQ53EP0 ZNF438-203ENST00000375311 2173 ntAPPRIS ALT2 TSL 2 BASIC8.11□□□□□ -1.11
FNDC3BQ53EP0 MED1-202ENST00000394287 2870 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
FNDC3BQ53EP0 IL5RA-206ENST00000430514 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
FNDC3BQ53EP0 GPR63-201ENST00000229955 5952 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
FNDC3BQ53EP0 HMSD-201ENST00000408945 2101 ntAPPRIS P1 TSL 3 BASIC8.11□□□□□ -1.11
FNDC3BQ53EP0 AL353753.1-201ENST00000612217 2320 ntTSL 2 BASIC8.11□□□□□ -1.11
FNDC3BQ53EP0 TMCC3-203ENST00000551457 4361 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
FNDC3BQ53EP0 LAX1-202ENST00000367217 1356 ntAPPRIS ALT2 TSL 2 BASIC8.1□□□□□ -1.11
FNDC3BQ53EP0 AL512283.1-201ENST00000606756 1384 ntBASIC8.1□□□□□ -1.11
FNDC3BQ53EP0 ZNF2-204ENST00000617923 3885 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
FNDC3BQ53EP0 PARP9-201ENST00000360356 3198 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
FNDC3BQ53EP0 MOBP-201ENST00000311042 3388 ntAPPRIS ALT2 TSL 2 BASIC8.1□□□□□ -1.11
FNDC3BQ53EP0 PLXNC1-205ENST00000547057 2455 ntTSL 2 BASIC8.1□□□□□ -1.11
FNDC3BQ53EP0 AC133485.2-201ENST00000566232 2484 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
FNDC3BQ53EP0 LINC01182-202ENST00000510907 2228 ntTSL 2 BASIC8.1□□□□□ -1.11
FNDC3BQ53EP0 NPEPPS-215ENST00000530173 2864 ntTSL 2 BASIC8.1□□□□□ -1.11
FNDC3BQ53EP0 CORIN-205ENST00000504584 2417 ntTSL 2 BASIC8.1□□□□□ -1.11
FNDC3BQ53EP0 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
FNDC3BQ53EP0 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
FNDC3BQ53EP0 ZNF20-201ENST00000334213 3061 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
FNDC3BQ53EP0 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC8.1□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms