Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AL157871.5-201ENST00000555212 533 ntTSL 2 BASIC9.75□□□□□ -0.85
COL15A1P39059 GLUD1P2-201ENST00000583339 201 ntBASIC9.75□□□□□ -0.85
COL15A1P39059 GLUD1P8-201ENST00000585063 203 ntBASIC9.75□□□□□ -0.85
COL15A1P39059 TTN-AS1-215ENST00000585451 949 ntTSL 5 BASIC9.75□□□□□ -0.85
COL15A1P39059 SIGLEC31P-201ENST00000594237 551 ntBASIC9.75□□□□□ -0.85
COL15A1P39059 MAGEB5-201ENST00000602297 1216 ntAPPRIS P1 TSL 3 BASIC9.75□□□□□ -0.85
COL15A1P39059 AC024085.1-201ENST00000604299 432 ntBASIC9.75□□□□□ -0.85
COL15A1P39059 AP005328.2-201ENST00000606879 657 ntTSL 3 BASIC9.75□□□□□ -0.85
COL15A1P39059 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC9.75□□□□□ -0.85
COL15A1P39059 AC124319.3-201ENST00000616832 526 ntBASIC9.75□□□□□ -0.85
COL15A1P39059 TTN-AS1-265ENST00000627661 806 ntTSL 5 BASIC9.75□□□□□ -0.85
COL15A1P39059 AC243725.1-201ENST00000637164 436 ntBASIC9.75□□□□□ -0.85
COL15A1P39059 OR8A1-204ENST00000642111 1145 ntBASIC9.75□□□□□ -0.85
COL15A1P39059 STAT2-202ENST00000418572 1548 ntTSL 2 BASIC9.75□□□□□ -0.85
COL15A1P39059 MTA3-201ENST00000405094 1785 ntTSL 5 BASIC9.74□□□□□ -0.85
COL15A1P39059 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC9.74□□□□□ -0.85
COL15A1P39059 LINC02128-205ENST00000641755 1334 ntBASIC9.74□□□□□ -0.85
COL15A1P39059 RPS20-205ENST00000519807 1826 ntTSL 2 BASIC9.74□□□□□ -0.85
COL15A1P39059 MFSD8-227ENST00000641393 4069 ntBASIC9.74□□□□□ -0.85
COL15A1P39059 NAIP-204ENST00000503719 5347 ntTSL 5 BASIC9.74□□□□□ -0.85
COL15A1P39059 EEF1A1P22-201ENST00000559385 1380 ntBASIC9.74□□□□□ -0.85
COL15A1P39059 TXLNG-201ENST00000380122 4401 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
COL15A1P39059 PDE7A-202ENST00000396642 2986 ntTSL 2 BASIC9.74□□□□□ -0.85
COL15A1P39059 AC016705.2-202ENST00000559008 6878 ntTSL 3 BASIC9.74□□□□□ -0.85
COL15A1P39059 GON4L-219ENST00000622608 4801 ntTSL 5 BASIC9.74□□□□□ -0.85
COL15A1P39059 ZEB2-236ENST00000636471 9583 ntTSL 5 BASIC9.74□□□□□ -0.85
COL15A1P39059 PTBP3-203ENST00000343327 2755 ntTSL 2 BASIC9.74□□□□□ -0.85
COL15A1P39059 OGDH-210ENST00000631326 4116 ntTSL 5 BASIC9.74□□□□□ -0.85
COL15A1P39059 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
COL15A1P39059 KRT23-202ENST00000436344 1485 ntTSL 2 BASIC9.74□□□□□ -0.85
COL15A1P39059 PRNT-201ENST00000326539 2333 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
COL15A1P39059 HIVEP2-203ENST00000367604 10032 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
COL15A1P39059 FRMD7-201ENST00000298542 3198 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
COL15A1P39059 LMLN-202ENST00000332636 1812 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
COL15A1P39059 RNU1-38P-201ENST00000362817 144 ntBASIC9.74□□□□□ -0.85
COL15A1P39059 AL139327.1-201ENST00000382988 348 ntBASIC9.74□□□□□ -0.85
COL15A1P39059 RNA5SP23-201ENST00000391006 105 ntBASIC9.74□□□□□ -0.85
COL15A1P39059 SETP22-201ENST00000412243 957 ntBASIC9.74□□□□□ -0.85
COL15A1P39059 RNF11P2-201ENST00000427702 440 ntBASIC9.74□□□□□ -0.85
COL15A1P39059 AF274573.1-201ENST00000430535 494 ntBASIC9.74□□□□□ -0.85
COL15A1P39059 RPL14P5-201ENST00000436474 730 ntBASIC9.74□□□□□ -0.85
COL15A1P39059 AC097527.1-201ENST00000437031 530 ntBASIC9.74□□□□□ -0.85
COL15A1P39059 IGLVIV-59-201ENST00000520218 250 ntBASIC9.74□□□□□ -0.85
COL15A1P39059 AC103974.1-201ENST00000527285 874 ntTSL 3 BASIC9.74□□□□□ -0.85
COL15A1P39059 ANKRD20A19P-203ENST00000602724 295 ntBASIC9.74□□□□□ -0.85
COL15A1P39059 LINC00559-201ENST00000569476 3867 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
COL15A1P39059 MATR3-229ENST00000361059 3970 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
COL15A1P39059 CCL28-201ENST00000361115 3126 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
COL15A1P39059 BTBD3-202ENST00000378226 4904 ntAPPRIS P4 TSL 1 (best) BASIC9.73□□□□□ -0.85
COL15A1P39059 ZNF507-201ENST00000311921 7638 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
COL15A1P39059 C6orf89-202ENST00000359359 2565 ntTSL 5 BASIC9.73□□□□□ -0.85
COL15A1P39059 AC022400.3-201ENST00000399449 3810 ntTSL 5 BASIC9.73□□□□□ -0.85
COL15A1P39059 INO80C-212ENST00000592173 3245 ntTSL 2 BASIC9.73□□□□□ -0.85
COL15A1P39059 PCDH15-210ENST00000395438 5806 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
COL15A1P39059 AC007388.1-201ENST00000426083 1438 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
COL15A1P39059 CEACAM6-201ENST00000199764 2700 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
COL15A1P39059 TROVE2-201ENST00000367441 1791 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
COL15A1P39059 LINC00299-201ENST00000430192 1760 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
COL15A1P39059 SERPIND1-201ENST00000215727 2437 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
COL15A1P39059 SORBS1-209ENST00000371245 2779 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
COL15A1P39059 CACNB2-205ENST00000377319 3116 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
COL15A1P39059 TMCC1-AS1-204ENST00000605830 3496 ntTSL 2 BASIC9.73□□□□□ -0.85
COL15A1P39059 AC073065.1-201ENST00000411678 2866 ntBASIC9.73□□□□□ -0.85
COL15A1P39059 GSTCD-211ENST00000515279 4273 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
COL15A1P39059 AC007923.2-201ENST00000584218 1591 ntBASIC9.73□□□□□ -0.85
COL15A1P39059 PTBP3-205ENST00000374257 7240 ntAPPRIS ALT1 TSL 2 BASIC9.73□□□□□ -0.85
COL15A1P39059 EPPK1-202ENST00000615648 16002 ntAPPRIS P2 TSL 5 BASIC9.73□□□□□ -0.85
COL15A1P39059 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
COL15A1P39059 AL445430.2-201ENST00000423149 686 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
COL15A1P39059 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC9.73□□□□□ -0.85
COL15A1P39059 LINC00331-201ENST00000446391 376 ntTSL 5 BASIC9.73□□□□□ -0.85
COL15A1P39059 RPLP0P1-201ENST00000457002 361 ntBASIC9.73□□□□□ -0.85
COL15A1P39059 PPP4R2-207ENST00000495566 559 ntTSL 3 BASIC9.73□□□□□ -0.85
COL15A1P39059 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC9.73□□□□□ -0.85
COL15A1P39059 ARGFXP2-201ENST00000579304 949 ntBASIC9.73□□□□□ -0.85
COL15A1P39059 AC012640.3-201ENST00000607847 430 ntBASIC9.73□□□□□ -0.85
COL15A1P39059 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
COL15A1P39059 MALAT1-208ENST00000616527 572 ntTSL 3 BASIC9.73□□□□□ -0.85
COL15A1P39059 AC243830.2-201ENST00000618067 630 ntBASIC9.73□□□□□ -0.85
COL15A1P39059 AC106782.7-201ENST00000624024 418 ntBASIC9.73□□□□□ -0.85
COL15A1P39059 AC133555.5-201ENST00000624430 418 ntBASIC9.73□□□□□ -0.85
COL15A1P39059 ESRRG-221ENST00000493603 5304 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
COL15A1P39059 PIWIL3-201ENST00000332271 3504 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
COL15A1P39059 RNF152-201ENST00000312828 9501 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
COL15A1P39059 AURKA-206ENST00000395913 2169 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
COL15A1P39059 AL391380.1-201ENST00000439300 1432 ntBASIC9.72□□□□□ -0.85
COL15A1P39059 PEG10-206ENST00000612941 6392 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
COL15A1P39059 PEG10-209ENST00000617526 6392 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
COL15A1P39059 CD36-214ENST00000447544 2298 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
COL15A1P39059 ZNF438-202ENST00000361310 3144 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
COL15A1P39059 AC008498.2-201ENST00000624033 2322 ntBASIC9.72□□□□□ -0.85
COL15A1P39059 PPARGC1A-206ENST00000507380 2385 ntTSL 2 BASIC9.72□□□□□ -0.85
COL15A1P39059 TMEM217-201ENST00000336655 1546 ntAPPRIS P3 TSL 2 BASIC9.72□□□□□ -0.85
COL15A1P39059 ZNF300-202ENST00000394226 3256 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
COL15A1P39059 ZMYND8-203ENST00000352431 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
COL15A1P39059 USP14-201ENST00000261601 4921 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
COL15A1P39059 FAM193A-203ENST00000502458 4083 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
COL15A1P39059 AASS-203ENST00000417368 3163 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
COL15A1P39059 MLYCD-201ENST00000262430 13038 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
COL15A1P39059 ZNF610-207ENST00000601151 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms