Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
NID1P14543 PTPRT-206ENST00000373198 12746 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
NID1P14543 DLSTP1-201ENST00000444241 1354 ntBASIC8.15□□□□□ -1.1
NID1P14543 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
NID1P14543 RNA5-8SP2-201ENST00000363564 152 ntBASIC8.15□□□□□ -1.1
NID1P14543 RNU4-68P-201ENST00000364314 141 ntBASIC8.15□□□□□ -1.1
NID1P14543 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC8.15□□□□□ -1.1
NID1P14543 RABL2A-201ENST00000376439 623 ntTSL 5 BASIC8.15□□□□□ -1.1
NID1P14543 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
NID1P14543 RN7SKP251-201ENST00000410830 314 ntBASIC8.15□□□□□ -1.1
NID1P14543 ING4-203ENST00000412586 741 ntAPPRIS ALT1 TSL 1 (best) BASIC8.15□□□□□ -1.1
NID1P14543 NRIR-202ENST00000414795 506 ntTSL 3 BASIC8.15□□□□□ -1.1
NID1P14543 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC8.15□□□□□ -1.1
NID1P14543 ING4-204ENST00000423703 602 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
NID1P14543 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC8.15□□□□□ -1.1
NID1P14543 ZNF863P-201ENST00000426746 417 ntBASIC8.15□□□□□ -1.1
NID1P14543 TRMT112P4-201ENST00000429016 379 ntBASIC8.15□□□□□ -1.1
NID1P14543 AC011998.2-201ENST00000430884 473 ntBASIC8.15□□□□□ -1.1
NID1P14543 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC8.15□□□□□ -1.1
NID1P14543 ST13P2-201ENST00000438916 1109 ntBASIC8.15□□□□□ -1.1
NID1P14543 AC007349.2-201ENST00000439998 553 ntTSL 2 BASIC8.15□□□□□ -1.1
NID1P14543 ING4-206ENST00000444704 678 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
NID1P14543 C1DP3-201ENST00000455013 423 ntBASIC8.15□□□□□ -1.1
NID1P14543 SHROOM4-203ENST00000460112 8919 ntTSL 5 BASIC8.15□□□□□ -1.1
NID1P14543 CENPS-202ENST00000462462 584 ntTSL 3 BASIC8.15□□□□□ -1.1
NID1P14543 ZBTB20-AS5-201ENST00000465249 622 ntTSL 3 BASIC8.15□□□□□ -1.1
NID1P14543 AC108114.1-201ENST00000477321 437 ntBASIC8.15□□□□□ -1.1
NID1P14543 PPP1R2P6-201ENST00000478565 588 ntBASIC8.15□□□□□ -1.1
NID1P14543 AC131233.1-201ENST00000479200 955 ntBASIC8.15□□□□□ -1.1
NID1P14543 RPL5P14-201ENST00000494197 878 ntBASIC8.15□□□□□ -1.1
NID1P14543 AC087672.3-201ENST00000519323 738 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
NID1P14543 AC124290.2-201ENST00000519431 286 ntBASIC8.15□□□□□ -1.1
NID1P14543 OR4A2P-201ENST00000527276 913 ntBASIC8.15□□□□□ -1.1
NID1P14543 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC8.15□□□□□ -1.1
NID1P14543 BRWD1P2-201ENST00000546823 340 ntBASIC8.15□□□□□ -1.1
NID1P14543 CRADD-211ENST00000552983 839 ntTSL 5 BASIC8.15□□□□□ -1.1
NID1P14543 AL512310.9-201ENST00000553311 948 ntBASIC8.15□□□□□ -1.1
NID1P14543 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC8.15□□□□□ -1.1
NID1P14543 AP005205.1-201ENST00000563503 508 ntBASIC8.15□□□□□ -1.1
NID1P14543 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC8.15□□□□□ -1.1
NID1P14543 AC009120.2-203ENST00000565313 539 ntTSL 3 BASIC8.15□□□□□ -1.1
NID1P14543 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC8.15□□□□□ -1.1
NID1P14543 AC009101.1-201ENST00000568135 242 ntBASIC8.15□□□□□ -1.1
NID1P14543 AC025283.1-201ENST00000572039 734 ntBASIC8.15□□□□□ -1.1
NID1P14543 AC003965.1-201ENST00000575693 667 ntTSL 3 BASIC8.15□□□□□ -1.1
NID1P14543 AC233702.4-201ENST00000581610 304 ntBASIC8.15□□□□□ -1.1
NID1P14543 snoZ6.4-201ENST00000581669 55 ntBASIC8.15□□□□□ -1.1
NID1P14543 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC8.15□□□□□ -1.1
NID1P14543 AC008759.1-201ENST00000589783 983 ntBASIC8.15□□□□□ -1.1
NID1P14543 AP002505.1-201ENST00000592655 228 ntTSL 5 BASIC8.15□□□□□ -1.1
NID1P14543 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
NID1P14543 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
NID1P14543 AC005197.1-201ENST00000597769 683 ntTSL 5 BASIC8.15□□□□□ -1.1
NID1P14543 AL137002.1-201ENST00000600642 182 ntBASIC8.15□□□□□ -1.1
NID1P14543 AC010359.1-201ENST00000602982 507 ntBASIC8.15□□□□□ -1.1
NID1P14543 TRMT112P7-201ENST00000603133 367 ntBASIC8.15□□□□□ -1.1
NID1P14543 AC004840.2-201ENST00000603368 285 ntBASIC8.15□□□□□ -1.1
NID1P14543 AP002906.1-201ENST00000603405 233 ntBASIC8.15□□□□□ -1.1
NID1P14543 Metazoa_SRP.98-201ENST00000610878 274 ntBASIC8.15□□□□□ -1.1
NID1P14543 AL121583.1-201ENST00000612444 682 ntBASIC8.15□□□□□ -1.1
NID1P14543 AC025253.1-201ENST00000613623 543 ntBASIC8.15□□□□□ -1.1
NID1P14543 FRG1HP-203ENST00000615326 593 ntTSL 3 BASIC8.15□□□□□ -1.1
NID1P14543 HOXA11-AS1_2.1-201ENST00000615604 187 ntBASIC8.15□□□□□ -1.1
NID1P14543 YARS-210ENST00000616261 1167 ntTSL 5 BASIC8.15□□□□□ -1.1
NID1P14543 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC8.15□□□□□ -1.1
NID1P14543 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC8.15□□□□□ -1.1
NID1P14543 AC091965.5-201ENST00000624785 342 ntBASIC8.15□□□□□ -1.1
NID1P14543 LINC01320-214ENST00000627935 916 ntTSL 5 BASIC8.15□□□□□ -1.1
NID1P14543 CCDC163-207ENST00000629482 953 ntAPPRIS P5 TSL 1 (best) BASIC8.15□□□□□ -1.1
NID1P14543 SGO1-AS1-206ENST00000635369 442 ntTSL 5 BASIC8.15□□□□□ -1.1
NID1P14543 AC068137.3-201ENST00000639191 341 ntBASIC8.15□□□□□ -1.1
NID1P14543 AC073869.6-201ENST00000640656 341 ntBASIC8.15□□□□□ -1.1
NID1P14543 AC024896.1-201ENST00000500632 2549 ntTSL 5 BASIC8.15□□□□□ -1.1
NID1P14543 GALR1-201ENST00000299727 10044 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
NID1P14543 CTNND1-208ENST00000428599 6016 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
NID1P14543 AC092279.2-201ENST00000623742 2189 ntBASIC8.15□□□□□ -1.11
NID1P14543 SNCA-206ENST00000420646 3127 ntTSL 2 BASIC8.15□□□□□ -1.11
NID1P14543 ZNF619-210ENST00000522736 2030 ntTSL 5 BASIC8.15□□□□□ -1.11
NID1P14543 CEP68-205ENST00000537589 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.11
NID1P14543 GPNMB-202ENST00000381990 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.11
NID1P14543 BTN2A3P-201ENST00000377662 1836 ntBASIC8.15□□□□□ -1.11
NID1P14543 TBCK-201ENST00000273980 8101 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.11
NID1P14543 ZNF546-207ENST00000600094 3426 ntAPPRIS ALT2 TSL 2 BASIC8.15□□□□□ -1.11
NID1P14543 METTL15-204ENST00000407364 4242 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
NID1P14543 CCR9-203ENST00000395963 2512 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
NID1P14543 CD22-201ENST00000085219 3268 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
NID1P14543 CCDC15-201ENST00000344762 3893 ntAPPRIS P2 TSL 5 BASIC8.14□□□□□ -1.11
NID1P14543 SFR1-202ENST00000369729 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
NID1P14543 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
NID1P14543 RUNX1T1-250ENST00000614812 7483 ntAPPRIS P3 TSL 5 BASIC8.14□□□□□ -1.11
NID1P14543 NUP93-210ENST00000564887 2875 ntTSL 2 BASIC8.14□□□□□ -1.11
NID1P14543 AC090061.1-202ENST00000502102 1449 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
NID1P14543 AC004520.1-201ENST00000608362 1413 ntBASIC8.14□□□□□ -1.11
NID1P14543 SERPINA9-203ENST00000380365 1333 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
NID1P14543 BRPF3-212ENST00000534694 4628 ntTSL 5 BASIC8.14□□□□□ -1.11
NID1P14543 AC010487.3-201ENST00000634278 1966 ntAPPRIS P1 TSL 2 BASIC8.14□□□□□ -1.11
NID1P14543 ATAD2-205ENST00000521903 5143 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
NID1P14543 IL37-201ENST00000263326 772 ntAPPRIS P4 TSL 1 (best) BASIC8.14□□□□□ -1.11
NID1P14543 PSG9-203ENST00000291752 1055 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
NID1P14543 RPL7A-201ENST00000315731 680 ntTSL 2 BASIC8.14□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms