Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 WDR64-204ENST00000437684 2310 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
UBE4BO95155 APP-209ENST00000440126 2846 ntTSL 2 BASIC8.49□□□□□ -1.05
UBE4BO95155 TNS4-201ENST00000254051 4067 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
UBE4BO95155 HPSE2-204ENST00000404542 3681 ntTSL 5 BASIC8.49□□□□□ -1.05
UBE4BO95155 HINFP-201ENST00000350777 3163 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
UBE4BO95155 BBX-207ENST00000416476 2178 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
UBE4BO95155 ZNF493-201ENST00000339914 1665 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
UBE4BO95155 GPI-202ENST00000415930 4000 ntTSL 2 BASIC8.49□□□□□ -1.05
UBE4BO95155 NUTM2B-AS1-212ENST00000610681 4241 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
UBE4BO95155 CYP8B1-201ENST00000316161 3974 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
UBE4BO95155 ERAP2-201ENST00000379904 3219 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
UBE4BO95155 ERBB3-221ENST00000553131 3237 ntTSL 2 BASIC8.49□□□□□ -1.05
UBE4BO95155 PRLR-202ENST00000310101 1297 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
UBE4BO95155 PTTG1-201ENST00000352433 753 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
UBE4BO95155 RNA5SP389-201ENST00000362610 115 ntBASIC8.49□□□□□ -1.05
UBE4BO95155 RNA5SP226-201ENST00000362653 115 ntBASIC8.49□□□□□ -1.05
UBE4BO95155 RNA5SP161-201ENST00000363871 115 ntBASIC8.49□□□□□ -1.05
UBE4BO95155 RNA5SP149-201ENST00000364952 92 ntBASIC8.49□□□□□ -1.05
UBE4BO95155 LPAR1-202ENST00000374430 2993 ntAPPRIS P2 TSL 1 (best) BASIC8.49□□□□□ -1.05
UBE4BO95155 C6orf48-201ENST00000375633 586 ntAPPRIS P1 TSL 2 BASIC8.49□□□□□ -1.05
UBE4BO95155 AMELY-202ENST00000383036 621 ntTSL 5 BASIC8.49□□□□□ -1.05
UBE4BO95155 AL390039.1-201ENST00000399148 611 ntBASIC8.49□□□□□ -1.05
UBE4BO95155 AL034372.1-201ENST00000407586 754 ntBASIC8.49□□□□□ -1.05
UBE4BO95155 AL645634.1-201ENST00000418426 462 ntTSL 3 BASIC8.49□□□□□ -1.05
UBE4BO95155 PGAM1P3-201ENST00000420790 565 ntBASIC8.49□□□□□ -1.05
UBE4BO95155 BMS1P12-201ENST00000428213 706 ntBASIC8.49□□□□□ -1.05
UBE4BO95155 FO393419.1-201ENST00000443746 355 ntBASIC8.49□□□□□ -1.05
UBE4BO95155 AC013787.1-201ENST00000460165 307 ntBASIC8.49□□□□□ -1.05
UBE4BO95155 MKNK1-207ENST00000465783 464 ntTSL 2 BASIC8.49□□□□□ -1.05
UBE4BO95155 RN7SL36P-201ENST00000469345 276 ntBASIC8.49□□□□□ -1.05
UBE4BO95155 RN7SL608P-201ENST00000492377 279 ntBASIC8.49□□□□□ -1.05
UBE4BO95155 AC109454.2-201ENST00000503470 520 ntTSL 5 BASIC8.49□□□□□ -1.05
UBE4BO95155 AC023794.3-204ENST00000510754 236 ntBASIC8.49□□□□□ -1.05
UBE4BO95155 LINC02200-203ENST00000513687 541 ntTSL 3 BASIC8.49□□□□□ -1.05
UBE4BO95155 DCSTAMP-203ENST00000517991 949 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
UBE4BO95155 CARD8-214ENST00000520007 614 ntTSL 2 BASIC8.49□□□□□ -1.05
UBE4BO95155 AC022639.1-201ENST00000523191 573 ntTSL 4 BASIC8.49□□□□□ -1.05
UBE4BO95155 CRYAB-203ENST00000525823 915 ntTSL 2 BASIC8.49□□□□□ -1.05
UBE4BO95155 AL590560.1-203ENST00000544342 408 ntAPPRIS ALT2 TSL 2 BASIC8.49□□□□□ -1.05
UBE4BO95155 AC093334.1-201ENST00000559904 423 ntTSL 3 BASIC8.49□□□□□ -1.05
UBE4BO95155 MIR4793-201ENST00000577502 87 ntBASIC8.49□□□□□ -1.05
UBE4BO95155 AC100843.2-201ENST00000589084 324 ntTSL 5 BASIC8.49□□□□□ -1.05
UBE4BO95155 AC060766.6-201ENST00000589099 394 ntTSL 3 BASIC8.49□□□□□ -1.05
UBE4BO95155 AC074135.1-201ENST00000594318 581 ntTSL 4 BASIC8.49□□□□□ -1.05
UBE4BO95155 ZNF595-204ENST00000609518 2115 ntAPPRIS ALT2 TSL 2 BASIC8.49□□□□□ -1.05
UBE4BO95155 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
UBE4BO95155 CD46-209ENST00000367047 3089 ntTSL 5 BASIC8.49□□□□□ -1.05
UBE4BO95155 KIAA1257-205ENST00000515659 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
UBE4BO95155 SELENOP-203ENST00000506577 2204 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
UBE4BO95155 CDY2B-201ENST00000382867 1961 ntAPPRIS ALT1 BASIC8.49□□□□□ -1.05
UBE4BO95155 GALNTL5-201ENST00000392800 1719 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
UBE4BO95155 CASK-204ENST00000378166 3123 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.05
UBE4BO95155 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
UBE4BO95155 LINC02035-201ENST00000610128 5476 ntBASIC8.48□□□□□ -1.05
UBE4BO95155 C9orf131-201ENST00000312292 3409 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.05
UBE4BO95155 LRRC4C-202ENST00000527150 3085 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
UBE4BO95155 AC127502.2-201ENST00000602663 2351 ntBASIC8.48□□□□□ -1.05
UBE4BO95155 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
UBE4BO95155 TIAL1-205ENST00000436547 1401 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
UBE4BO95155 C12orf77-202ENST00000549262 1443 ntTSL 4 BASIC8.48□□□□□ -1.05
UBE4BO95155 EVI2A-203ENST00000462804 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
UBE4BO95155 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
UBE4BO95155 GUCY2GP-201ENST00000479705 3222 ntBASIC8.48□□□□□ -1.05
UBE4BO95155 FCGR3A-201ENST00000367967 2086 ntAPPRIS P1 TSL 3 BASIC8.48□□□□□ -1.05
UBE4BO95155 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC8.48□□□□□ -1.05
UBE4BO95155 ARPP21-221ENST00000444190 3182 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
UBE4BO95155 SEMA6A-210ENST00000510263 3292 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
UBE4BO95155 GSTA10P-201ENST00000412182 576 ntBASIC8.48□□□□□ -1.05
UBE4BO95155 AC007422.2-201ENST00000419809 167 ntTSL 3 BASIC8.48□□□□□ -1.05
UBE4BO95155 AC093580.1-201ENST00000420549 671 ntTSL 3 BASIC8.48□□□□□ -1.05
UBE4BO95155 GRM7-AS2-201ENST00000427748 520 ntTSL 2 BASIC8.48□□□□□ -1.05
UBE4BO95155 LINC01805-201ENST00000436433 572 ntTSL 5 BASIC8.48□□□□□ -1.05
UBE4BO95155 AC231532.1-201ENST00000438584 312 ntBASIC8.48□□□□□ -1.05
UBE4BO95155 ENTPD1-AS1-206ENST00000449197 523 ntTSL 2 BASIC8.48□□□□□ -1.05
UBE4BO95155 CASK-AS1-201ENST00000451126 515 ntTSL 2 BASIC8.48□□□□□ -1.05
UBE4BO95155 KIF3AP1-201ENST00000454055 611 ntBASIC8.48□□□□□ -1.05
UBE4BO95155 LINC02010-201ENST00000470860 516 ntTSL 4 BASIC8.48□□□□□ -1.05
UBE4BO95155 AC025180.1-201ENST00000505701 595 ntTSL 4 BASIC8.48□□□□□ -1.05
UBE4BO95155 DKK2-202ENST00000510463 908 ntTSL 3 BASIC8.48□□□□□ -1.05
UBE4BO95155 AC022441.1-201ENST00000512599 794 ntTSL 3 BASIC8.48□□□□□ -1.05
UBE4BO95155 AP004833.3-201ENST00000531893 322 ntBASIC8.48□□□□□ -1.05
UBE4BO95155 FXYD2-206ENST00000532119 562 ntAPPRIS P1 TSL 3 BASIC8.48□□□□□ -1.05
UBE4BO95155 AL358332.1-201ENST00000555649 813 ntTSL 5 BASIC8.48□□□□□ -1.05
UBE4BO95155 AC092757.2-201ENST00000559026 633 ntTSL 4 BASIC8.48□□□□□ -1.05
UBE4BO95155 TUBAP4-201ENST00000569261 416 ntBASIC8.48□□□□□ -1.05
UBE4BO95155 STX8-209ENST00000574431 731 ntTSL 3 BASIC8.48□□□□□ -1.05
UBE4BO95155 AC137735.1-201ENST00000581911 419 ntTSL 3 BASIC8.48□□□□□ -1.05
UBE4BO95155 AC016629.2-201ENST00000597341 199 ntBASIC8.48□□□□□ -1.05
UBE4BO95155 MILR1-202ENST00000612535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
UBE4BO95155 IGKV1OR1-1-201ENST00000613775 347 ntBASIC8.48□□□□□ -1.05
UBE4BO95155 AC010538.1-201ENST00000615131 663 ntBASIC8.48□□□□□ -1.05
UBE4BO95155 AC233702.2-201ENST00000618784 583 ntTSL 4 BASIC8.48□□□□□ -1.05
UBE4BO95155 OAZ3-211ENST00000639906 708 ntAPPRIS P2 TSL 5 BASIC8.48□□□□□ -1.05
UBE4BO95155 AMPD3-202ENST00000396553 3680 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
UBE4BO95155 TNFSF15-201ENST00000374044 2789 ntBASIC8.48□□□□□ -1.05
UBE4BO95155 FANCL-201ENST00000233741 1683 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
UBE4BO95155 FANCL-202ENST00000402135 1698 ntAPPRIS ALT1 TSL 2 BASIC8.47□□□□□ -1.05
UBE4BO95155 EBLN2-201ENST00000533473 1679 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
UBE4BO95155 AL035530.2-201ENST00000607391 1675 ntTSL 3 BASIC8.47□□□□□ -1.05
UBE4BO95155 TCF4-246ENST00000570287 3163 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms