Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
SNX18Q96RF0 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
SNX18Q96RF0 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC7.27□□□□□ -1.24
SNX18Q96RF0 GJA1-201ENST00000282561 3037 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
SNX18Q96RF0 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
SNX18Q96RF0 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC7.27□□□□□ -1.24
SNX18Q96RF0 AL627309.5-203ENST00000466557 1301 ntTSL 5 BASIC7.27□□□□□ -1.24
SNX18Q96RF0 GIMAP2-201ENST00000223293 1449 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
SNX18Q96RF0 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
SNX18Q96RF0 CAP2-203ENST00000465994 1404 ntTSL 2 BASIC7.27□□□□□ -1.24
SNX18Q96RF0 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
SNX18Q96RF0 PDIK1L-201ENST00000374269 2566 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
SNX18Q96RF0 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
SNX18Q96RF0 AL080317.3-201ENST00000607434 4315 ntBASIC7.27□□□□□ -1.25
SNX18Q96RF0 KAT14-206ENST00000489634 3152 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
SNX18Q96RF0 ERCC8-201ENST00000265038 2017 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
SNX18Q96RF0 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
SNX18Q96RF0 FOXM1-201ENST00000342628 3475 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
SNX18Q96RF0 PPIA-204ENST00000468812 2238 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
SNX18Q96RF0 CCDC162P-202ENST00000368966 6751 ntBASIC7.27□□□□□ -1.25
SNX18Q96RF0 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
SNX18Q96RF0 CTAGE3P-201ENST00000454280 2404 ntBASIC7.27□□□□□ -1.25
SNX18Q96RF0 ZNF667-202ENST00000504904 4390 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
SNX18Q96RF0 NSA2-205ENST00000610426 4594 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
SNX18Q96RF0 INO80C-212ENST00000592173 3245 ntTSL 2 BASIC7.27□□□□□ -1.25
SNX18Q96RF0 OR5E1P-201ENST00000305754 927 ntBASIC7.27□□□□□ -1.25
SNX18Q96RF0 KRTAP13-4-201ENST00000334068 797 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
SNX18Q96RF0 AKR1E2-203ENST00000345253 913 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
SNX18Q96RF0 TCTE3-201ENST00000366774 769 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
SNX18Q96RF0 AIF1-203ENST00000376059 711 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
SNX18Q96RF0 AC073621.2-201ENST00000381380 1024 ntBASIC7.27□□□□□ -1.25
SNX18Q96RF0 ZNF736P10Y-201ENST00000403990 1110 ntBASIC7.27□□□□□ -1.25
SNX18Q96RF0 VN2R10P-201ENST00000411871 853 ntBASIC7.27□□□□□ -1.25
SNX18Q96RF0 RPL36P1-201ENST00000419720 225 ntBASIC7.27□□□□□ -1.25
SNX18Q96RF0 AC011747.1-201ENST00000425678 565 ntTSL 4 BASIC7.27□□□□□ -1.25
SNX18Q96RF0 SEPHS1P1-201ENST00000426891 958 ntBASIC7.27□□□□□ -1.25
SNX18Q96RF0 RPL12P4-201ENST00000432629 497 ntBASIC7.27□□□□□ -1.25
SNX18Q96RF0 ASS1P5-201ENST00000435496 1239 ntBASIC7.27□□□□□ -1.25
SNX18Q96RF0 RPS3AP29-201ENST00000437728 769 ntBASIC7.27□□□□□ -1.25
SNX18Q96RF0 OR13C1P-201ENST00000457612 963 ntBASIC7.27□□□□□ -1.25
SNX18Q96RF0 AC007731.3-201ENST00000458154 446 ntTSL 5 BASIC7.27□□□□□ -1.25
SNX18Q96RF0 DAZAP2P1-201ENST00000475212 503 ntBASIC7.27□□□□□ -1.25
SNX18Q96RF0 RPL12P32-201ENST00000484010 494 ntBASIC7.27□□□□□ -1.25
SNX18Q96RF0 RWDD4P1-201ENST00000488019 565 ntBASIC7.27□□□□□ -1.25
SNX18Q96RF0 CSNK1A1P3-201ENST00000504105 330 ntBASIC7.27□□□□□ -1.25
SNX18Q96RF0 AC124067.1-201ENST00000517897 169 ntTSL 3 BASIC7.27□□□□□ -1.25
SNX18Q96RF0 AC007751.2-201ENST00000534173 291 ntBASIC7.27□□□□□ -1.25
SNX18Q96RF0 AC122688.2-201ENST00000543922 585 ntTSL 3 BASIC7.27□□□□□ -1.25
SNX18Q96RF0 MUCL1-202ENST00000546809 439 ntAPPRIS ALT2 TSL 3 BASIC7.27□□□□□ -1.25
SNX18Q96RF0 AC079384.1-201ENST00000548506 600 ntTSL 4 BASIC7.27□□□□□ -1.25
SNX18Q96RF0 LINC01588-211ENST00000556434 892 ntTSL 5 BASIC7.27□□□□□ -1.25
SNX18Q96RF0 AC104046.1-201ENST00000559487 406 ntBASIC7.27□□□□□ -1.25
SNX18Q96RF0 AC010931.3-201ENST00000561647 554 ntTSL 3 BASIC7.27□□□□□ -1.25
SNX18Q96RF0 AC022558.2-201ENST00000566841 754 ntTSL 5 BASIC7.27□□□□□ -1.25
SNX18Q96RF0 TEX51-207ENST00000568484 731 ntAPPRIS P2 TSL 3 BASIC7.27□□□□□ -1.25
SNX18Q96RF0 PRR13P4-201ENST00000577786 421 ntBASIC7.27□□□□□ -1.25
SNX18Q96RF0 AC025198.1-201ENST00000578331 419 ntBASIC7.27□□□□□ -1.25
SNX18Q96RF0 AP005202.1-202ENST00000583065 748 ntTSL 5 BASIC7.27□□□□□ -1.25
SNX18Q96RF0 MIR4450-201ENST00000583589 65 ntBASIC7.27□□□□□ -1.25
SNX18Q96RF0 AC011444.4-201ENST00000586415 418 ntBASIC7.27□□□□□ -1.25
SNX18Q96RF0 AC015802.4-201ENST00000589963 578 ntTSL 3 BASIC7.27□□□□□ -1.25
SNX18Q96RF0 ADGRF5P1-202ENST00000590130 980 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
SNX18Q96RF0 AC073575.2-201ENST00000614212 627 ntBASIC7.27□□□□□ -1.25
SNX18Q96RF0 ELMO2P1-202ENST00000614283 794 ntBASIC7.27□□□□□ -1.25
SNX18Q96RF0 PROX1-AS1-221ENST00000615085 673 ntTSL 5 BASIC7.27□□□□□ -1.25
SNX18Q96RF0 Metazoa_SRP.192-201ENST00000616260 286 ntBASIC7.27□□□□□ -1.25
SNX18Q96RF0 KDM5DP1-201ENST00000622542 298 ntBASIC7.27□□□□□ -1.25
SNX18Q96RF0 AC004009.3-201ENST00000624160 645 ntBASIC7.27□□□□□ -1.25
SNX18Q96RF0 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC7.27□□□□□ -1.25
SNX18Q96RF0 RAD51B-211ENST00000487861 1673 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
SNX18Q96RF0 CEACAM5-208ENST00000615021 1694 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
SNX18Q96RF0 OAT-208ENST00000539214 1864 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
SNX18Q96RF0 STX2-203ENST00000392373 2151 ntAPPRIS P4 TSL 5 BASIC7.27□□□□□ -1.25
SNX18Q96RF0 DET1-202ENST00000444300 2154 ntTSL 5 BASIC7.27□□□□□ -1.25
SNX18Q96RF0 MEF2C-221ENST00000514015 2772 ntTSL 5 BASIC7.27□□□□□ -1.25
SNX18Q96RF0 MAGT1-205ENST00000618282 2788 ntAPPRIS ALT1 TSL 1 (best) BASIC7.27□□□□□ -1.25
SNX18Q96RF0 TLR10-202ENST00000361424 3484 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
SNX18Q96RF0 DHX57-203ENST00000457308 4859 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
SNX18Q96RF0 MRAS-211ENST00000621127 3801 ntTSL 5 BASIC7.27□□□□□ -1.25
SNX18Q96RF0 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC7.27□□□□□ -1.25
SNX18Q96RF0 TCF12-206ENST00000543579 1809 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
SNX18Q96RF0 AF127936.2-201ENST00000455253 1724 ntTSL 5 BASIC7.27□□□□□ -1.25
SNX18Q96RF0 GPM6A-221ENST00000515090 1500 ntTSL 2 BASIC7.27□□□□□ -1.25
SNX18Q96RF0 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC7.27□□□□□ -1.25
SNX18Q96RF0 AC092111.1-201ENST00000618256 3358 ntBASIC7.26□□□□□ -1.25
SNX18Q96RF0 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
SNX18Q96RF0 MITF-202ENST00000314589 1993 ntTSL 2 BASIC7.26□□□□□ -1.25
SNX18Q96RF0 PPARG-201ENST00000287820 1850 ntAPPRIS P4 TSL 1 (best) BASIC7.26□□□□□ -1.25
SNX18Q96RF0 MAP3K19-205ENST00000392917 1765 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SNX18Q96RF0 GJA10-201ENST00000369352 1652 ntAPPRIS P2 BASIC7.26□□□□□ -1.25
SNX18Q96RF0 ARHGEF7-208ENST00000426073 4921 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
SNX18Q96RF0 ESRP1-203ENST00000433389 3770 ntAPPRIS P4 TSL 1 (best) BASIC7.26□□□□□ -1.25
SNX18Q96RF0 SAG-201ENST00000409110 1591 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
SNX18Q96RF0 MMADHC-202ENST00000422782 1462 ntTSL 5 BASIC7.26□□□□□ -1.25
SNX18Q96RF0 OSGIN2-201ENST00000297438 4209 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SNX18Q96RF0 ZNF969P-201ENST00000510345 2341 ntBASIC7.26□□□□□ -1.25
SNX18Q96RF0 AGBL4-203ENST00000371838 1353 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
SNX18Q96RF0 ZNF726-202ENST00000334589 847 ntTSL 3 BASIC7.26□□□□□ -1.25
SNX18Q96RF0 RNVU1-15-201ENST00000384476 165 ntBASIC7.26□□□□□ -1.25
SNX18Q96RF0 TRIB2-203ENST00000405331 830 ntTSL 2 BASIC7.26□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms