Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AL139041.1-201ENST00000605480 610 ntBASIC7.31□□□□□ -1.24
SNX18Q96RF0 RN7SL715P-201ENST00000606972 286 ntBASIC7.31□□□□□ -1.24
SNX18Q96RF0 AL021368.1-201ENST00000607490 540 ntBASIC7.31□□□□□ -1.24
SNX18Q96RF0 AL592227.1-201ENST00000614748 126 ntBASIC7.31□□□□□ -1.24
SNX18Q96RF0 AC103691.1-201ENST00000619654 520 ntBASIC7.31□□□□□ -1.24
SNX18Q96RF0 MIR7156-201ENST00000620979 60 ntBASIC7.31□□□□□ -1.24
SNX18Q96RF0 Metazoa_SRP.42-201ENST00000621081 348 ntBASIC7.31□□□□□ -1.24
SNX18Q96RF0 PIAS1-201ENST00000249636 8115 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SNX18Q96RF0 AC027097.2-201ENST00000588925 1976 ntTSL 2 BASIC7.31□□□□□ -1.24
SNX18Q96RF0 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SNX18Q96RF0 LRRC37A2-201ENST00000333412 5177 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SNX18Q96RF0 ANXA2-202ENST00000396024 1676 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SNX18Q96RF0 TCF7L2-209ENST00000369395 1541 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SNX18Q96RF0 LRP4-AS1-201ENST00000502049 1504 ntTSL 2 BASIC7.31□□□□□ -1.24
SNX18Q96RF0 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC7.31□□□□□ -1.24
SNX18Q96RF0 AL589993.1-201ENST00000407450 2524 ntBASIC7.31□□□□□ -1.24
SNX18Q96RF0 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
SNX18Q96RF0 NLRP8-202ENST00000590542 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
SNX18Q96RF0 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SNX18Q96RF0 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC7.31□□□□□ -1.24
SNX18Q96RF0 GABRE-201ENST00000370328 3152 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SNX18Q96RF0 PHF7-202ENST00000347025 1472 ntTSL 5 BASIC7.3□□□□□ -1.24
SNX18Q96RF0 ZMYM6-203ENST00000373333 1473 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
SNX18Q96RF0 ZNF845-202ENST00000595091 4413 ntAPPRIS P1 TSL 4 BASIC7.3□□□□□ -1.24
SNX18Q96RF0 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
SNX18Q96RF0 ZNF544-201ENST00000269829 3547 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
SNX18Q96RF0 LINC01260-201ENST00000415889 1416 ntTSL 5 BASIC7.3□□□□□ -1.24
SNX18Q96RF0 TRMT13-203ENST00000370143 476 ntTSL 3 BASIC7.3□□□□□ -1.24
SNX18Q96RF0 TRBV5-1-201ENST00000390381 652 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
SNX18Q96RF0 CES5AP1-201ENST00000400418 859 ntBASIC7.3□□□□□ -1.24
SNX18Q96RF0 AL356432.2-201ENST00000407841 422 ntBASIC7.3□□□□□ -1.24
SNX18Q96RF0 MIR1184-2-201ENST00000408263 99 ntBASIC7.3□□□□□ -1.24
SNX18Q96RF0 MIR1184-1-201ENST00000408606 99 ntBASIC7.3□□□□□ -1.24
SNX18Q96RF0 MIR1184-3-201ENST00000408676 99 ntBASIC7.3□□□□□ -1.24
SNX18Q96RF0 GLS-205ENST00000409626 997 ntTSL 2 BASIC7.3□□□□□ -1.24
SNX18Q96RF0 TRBV30-201ENST00000417977 447 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
SNX18Q96RF0 RPSAP53-201ENST00000433498 862 ntBASIC7.3□□□□□ -1.24
SNX18Q96RF0 AC010099.2-201ENST00000443177 373 ntBASIC7.3□□□□□ -1.24
SNX18Q96RF0 PRELID1P3-201ENST00000450055 643 ntBASIC7.3□□□□□ -1.24
SNX18Q96RF0 OR5S1P-201ENST00000453063 951 ntBASIC7.3□□□□□ -1.24
SNX18Q96RF0 DNAJC9-AS1-203ENST00000457758 548 ntTSL 3 BASIC7.3□□□□□ -1.24
SNX18Q96RF0 RN7SL870P-201ENST00000460111 296 ntBASIC7.3□□□□□ -1.24
SNX18Q96RF0 RN7SL856P-201ENST00000461754 298 ntBASIC7.3□□□□□ -1.24
SNX18Q96RF0 CSF2RA-217ENST00000494969 489 ntTSL 5 BASIC7.3□□□□□ -1.24
SNX18Q96RF0 GSTO3P-201ENST00000504733 718 ntBASIC7.3□□□□□ -1.24
SNX18Q96RF0 AC090835.1-201ENST00000515189 1024 ntBASIC7.3□□□□□ -1.24
SNX18Q96RF0 AC091982.1-201ENST00000518134 520 ntBASIC7.3□□□□□ -1.24
SNX18Q96RF0 AC087273.2-201ENST00000519038 634 ntTSL 3 BASIC7.3□□□□□ -1.24
SNX18Q96RF0 CCNC-215ENST00000523799 1035 ntTSL 3 BASIC7.3□□□□□ -1.24
SNX18Q96RF0 OR7E158P-201ENST00000524483 910 ntBASIC7.3□□□□□ -1.24
SNX18Q96RF0 ZNF503-AS1-205ENST00000530606 549 ntTSL 4 BASIC7.3□□□□□ -1.24
SNX18Q96RF0 RASSF8-AS1-204ENST00000535436 1121 ntTSL 4 BASIC7.3□□□□□ -1.24
SNX18Q96RF0 AC079362.1-202ENST00000547089 278 ntTSL 3 BASIC7.3□□□□□ -1.24
SNX18Q96RF0 RN7SL123P-201ENST00000577239 292 ntBASIC7.3□□□□□ -1.24
SNX18Q96RF0 USP2-AS1-205ENST00000578923 895 ntTSL 2 BASIC7.3□□□□□ -1.24
SNX18Q96RF0 AC022148.2-201ENST00000586176 560 ntBASIC7.3□□□□□ -1.24
SNX18Q96RF0 AP005229.1-201ENST00000592198 810 ntTSL 3 BASIC7.3□□□□□ -1.24
SNX18Q96RF0 RPS11-202ENST00000594493 575 ntTSL 3 BASIC7.3□□□□□ -1.24
SNX18Q96RF0 AL358394.3-202ENST00000599308 832 ntTSL 5 BASIC7.3□□□□□ -1.24
SNX18Q96RF0 OR1X1P-201ENST00000606159 931 ntBASIC7.3□□□□□ -1.24
SNX18Q96RF0 TRIM59-208ENST00000543469 4615 ntTSL 5 BASIC7.3□□□□□ -1.24
SNX18Q96RF0 AC108099.1-201ENST00000564402 3258 ntBASIC7.3□□□□□ -1.24
SNX18Q96RF0 RNF139-AS1-201ENST00000499418 5654 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
SNX18Q96RF0 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SNX18Q96RF0 ERV3-1-201ENST00000394323 2719 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
SNX18Q96RF0 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SNX18Q96RF0 LINC02208-201ENST00000506769 2803 ntTSL 5 BASIC7.3□□□□□ -1.24
SNX18Q96RF0 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
SNX18Q96RF0 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SNX18Q96RF0 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC7.3□□□□□ -1.24
SNX18Q96RF0 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC7.29□□□□□ -1.24
SNX18Q96RF0 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC7.29□□□□□ -1.24
SNX18Q96RF0 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
SNX18Q96RF0 GCSAML-204ENST00000463359 1822 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
SNX18Q96RF0 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
SNX18Q96RF0 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC7.29□□□□□ -1.24
SNX18Q96RF0 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC7.29□□□□□ -1.24
SNX18Q96RF0 C9orf131-205ENST00000421362 3259 ntAPPRIS ALT2 TSL 4 BASIC7.29□□□□□ -1.24
SNX18Q96RF0 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
SNX18Q96RF0 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
SNX18Q96RF0 LINC02431-202ENST00000505329 1788 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
SNX18Q96RF0 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
SNX18Q96RF0 TTTY25P-201ENST00000558356 1505 ntBASIC7.29□□□□□ -1.24
SNX18Q96RF0 RPS3A-201ENST00000274065 934 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
SNX18Q96RF0 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
SNX18Q96RF0 AC104699.1-201ENST00000352271 414 ntTSL 3 BASIC7.29□□□□□ -1.24
SNX18Q96RF0 MAP1LC3C-201ENST00000357246 1182 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
SNX18Q96RF0 ZNF738-202ENST00000380870 1142 ntAPPRIS ALT2 TSL 2 BASIC7.29□□□□□ -1.24
SNX18Q96RF0 NPM1P10-201ENST00000398310 865 ntBASIC7.29□□□□□ -1.24
SNX18Q96RF0 IGKV1OR2-3-201ENST00000411475 288 ntBASIC7.29□□□□□ -1.24
SNX18Q96RF0 AL031733.1-201ENST00000422817 455 ntBASIC7.29□□□□□ -1.24
SNX18Q96RF0 AP000317.1-201ENST00000427022 805 ntTSL 3 BASIC7.29□□□□□ -1.24
SNX18Q96RF0 ATP5G1P5-201ENST00000429024 411 ntBASIC7.29□□□□□ -1.24
SNX18Q96RF0 AC012506.4-202ENST00000430051 572 ntTSL 5 BASIC7.29□□□□□ -1.24
SNX18Q96RF0 AC097527.1-201ENST00000437031 530 ntBASIC7.29□□□□□ -1.24
SNX18Q96RF0 AP000474.1-201ENST00000441465 680 ntTSL 3 BASIC7.29□□□□□ -1.24
SNX18Q96RF0 AC002486.2-201ENST00000447806 590 ntBASIC7.29□□□□□ -1.24
SNX18Q96RF0 LINC00265-202ENST00000448955 468 ntTSL 2 BASIC7.29□□□□□ -1.24
SNX18Q96RF0 YAP1P2-201ENST00000455104 610 ntBASIC7.29□□□□□ -1.24
SNX18Q96RF0 AL592464.2-201ENST00000457440 607 ntTSL 2 BASIC7.29□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms