Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC011447.6-201ENST00000623510 2598 ntBASIC7.23□□□□□ -1.25
NPIPA3F8WFD2 NUGGC-201ENST00000413272 3887 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
NPIPA3F8WFD2 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
NPIPA3F8WFD2 LINC00294-201ENST00000631190 3306 ntBASIC7.23□□□□□ -1.25
NPIPA3F8WFD2 AC073525.1-203ENST00000547040 2631 ntTSL 2 BASIC7.23□□□□□ -1.25
NPIPA3F8WFD2 ZNF20-201ENST00000334213 3061 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
NPIPA3F8WFD2 GNE-205ENST00000539815 3657 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
NPIPA3F8WFD2 NPM1-204ENST00000517671 1338 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
NPIPA3F8WFD2 DAZ2-206ENST00000382440 4119 ntAPPRIS P5 TSL 5 BASIC7.23□□□□□ -1.25
NPIPA3F8WFD2 PDIK1L-202ENST00000374271 4279 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
NPIPA3F8WFD2 HSD11B1-203ENST00000367028 1461 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
NPIPA3F8WFD2 AL133279.3-201ENST00000563140 2352 ntBASIC7.23□□□□□ -1.25
NPIPA3F8WFD2 CDH6-201ENST00000265071 8476 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
NPIPA3F8WFD2 CORIN-205ENST00000504584 2417 ntTSL 2 BASIC7.22□□□□□ -1.25
NPIPA3F8WFD2 GJA10-201ENST00000369352 1652 ntAPPRIS P2 BASIC7.22□□□□□ -1.25
NPIPA3F8WFD2 AMPD3-202ENST00000396553 3680 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
NPIPA3F8WFD2 ZNF337-201ENST00000252979 3205 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
NPIPA3F8WFD2 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
NPIPA3F8WFD2 MYRFL-203ENST00000547771 3465 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
NPIPA3F8WFD2 RNA5SP463-201ENST00000363030 120 ntBASIC7.22□□□□□ -1.25
NPIPA3F8WFD2 COQ3-202ENST00000369240 646 ntTSL 5 BASIC7.22□□□□□ -1.25
NPIPA3F8WFD2 AC068389.3-201ENST00000373384 529 ntTSL 4 BASIC7.22□□□□□ -1.25
NPIPA3F8WFD2 SEC61G-202ENST00000395535 459 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
NPIPA3F8WFD2 RNU2-5P-201ENST00000410533 180 ntBASIC7.22□□□□□ -1.25
NPIPA3F8WFD2 AC012594.1-235ENST00000424391 727 ntTSL 5 BASIC7.22□□□□□ -1.25
NPIPA3F8WFD2 AC104076.1-201ENST00000428080 265 ntTSL 3 BASIC7.22□□□□□ -1.25
NPIPA3F8WFD2 KRTAP9-11P-201ENST00000431013 525 ntBASIC7.22□□□□□ -1.25
NPIPA3F8WFD2 RPS21P1-201ENST00000434479 247 ntBASIC7.22□□□□□ -1.25
NPIPA3F8WFD2 SMYD1-202ENST00000438570 680 ntTSL 2 BASIC7.22□□□□□ -1.25
NPIPA3F8WFD2 AP001469.2-201ENST00000444966 390 ntTSL 5 BASIC7.22□□□□□ -1.25
NPIPA3F8WFD2 AL022068.1-208ENST00000447250 1016 ntTSL 2 BASIC7.22□□□□□ -1.25
NPIPA3F8WFD2 RPL10P6-201ENST00000457497 318 ntBASIC7.22□□□□□ -1.25
NPIPA3F8WFD2 RN7SL91P-201ENST00000469313 291 ntBASIC7.22□□□□□ -1.25
NPIPA3F8WFD2 AC114801.1-201ENST00000512633 297 ntBASIC7.22□□□□□ -1.25
NPIPA3F8WFD2 AC006065.2-201ENST00000536978 211 ntBASIC7.22□□□□□ -1.25
NPIPA3F8WFD2 AC004817.1-201ENST00000553621 721 ntTSL 4 BASIC7.22□□□□□ -1.25
NPIPA3F8WFD2 AC025430.1-201ENST00000561324 498 ntTSL 3 BASIC7.22□□□□□ -1.25
NPIPA3F8WFD2 AC087565.1-201ENST00000565061 391 ntTSL 5 BASIC7.22□□□□□ -1.25
NPIPA3F8WFD2 NDUFA3P1-201ENST00000588007 252 ntBASIC7.22□□□□□ -1.25
NPIPA3F8WFD2 AC008770.1-206ENST00000589551 523 ntTSL 3 BASIC7.22□□□□□ -1.25
NPIPA3F8WFD2 AC243960.3-201ENST00000599316 580 ntTSL 4 BASIC7.22□□□□□ -1.25
NPIPA3F8WFD2 RN7SL715P-201ENST00000606972 286 ntBASIC7.22□□□□□ -1.25
NPIPA3F8WFD2 Metazoa_SRP.99-201ENST00000621370 254 ntBASIC7.22□□□□□ -1.25
NPIPA3F8WFD2 C18orf12-201ENST00000623329 537 ntBASIC7.22□□□□□ -1.25
NPIPA3F8WFD2 LINC01125-248ENST00000627284 700 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
NPIPA3F8WFD2 AC012594.1-254ENST00000628002 438 ntTSL 5 BASIC7.22□□□□□ -1.25
NPIPA3F8WFD2 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
NPIPA3F8WFD2 HNRNPA2B1-201ENST00000354667 3664 ntAPPRIS ALT1 TSL 1 (best) BASIC7.22□□□□□ -1.25
NPIPA3F8WFD2 FKBP15-201ENST00000238256 4336 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
NPIPA3F8WFD2 WDR75-201ENST00000314761 2701 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
NPIPA3F8WFD2 EPB41L5-202ENST00000331393 1777 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
NPIPA3F8WFD2 ZNF667-202ENST00000504904 4390 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
NPIPA3F8WFD2 KCNIP4-204ENST00000382150 1645 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
NPIPA3F8WFD2 LINC01142-201ENST00000440404 1457 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
NPIPA3F8WFD2 SCARB2-211ENST00000638603 4284 ntTSL 5 BASIC7.22□□□□□ -1.25
NPIPA3F8WFD2 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
NPIPA3F8WFD2 ZNF415-214ENST00000597748 2461 ntTSL 5 BASIC7.22□□□□□ -1.25
NPIPA3F8WFD2 ZNF334-206ENST00000625284 2495 ntAPPRIS ALT2 TSL 2 BASIC7.22□□□□□ -1.25
NPIPA3F8WFD2 PSMC1P3-201ENST00000453822 1318 ntBASIC7.22□□□□□ -1.25
NPIPA3F8WFD2 ZEB2-210ENST00000440875 1809 ntTSL 5 BASIC7.22□□□□□ -1.25
NPIPA3F8WFD2 AC020895.2-201ENST00000624996 1839 ntBASIC7.22□□□□□ -1.25
NPIPA3F8WFD2 CCDC77-203ENST00000422000 2338 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
NPIPA3F8WFD2 AC011632.1-202ENST00000518128 2810 ntTSL 2 BASIC7.22□□□□□ -1.25
NPIPA3F8WFD2 AC087280.2-201ENST00000637205 4822 ntTSL 5 BASIC7.22□□□□□ -1.25
NPIPA3F8WFD2 RBBP4-206ENST00000458695 1674 ntTSL 2 BASIC7.22□□□□□ -1.25
NPIPA3F8WFD2 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
NPIPA3F8WFD2 USP13-203ENST00000496897 2747 ntTSL 2 BASIC7.21□□□□□ -1.25
NPIPA3F8WFD2 ZNF430-201ENST00000261560 3923 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
NPIPA3F8WFD2 GCNT2-216ENST00000495262 2214 ntAPPRIS ALT1 TSL 2 BASIC7.21□□□□□ -1.25
NPIPA3F8WFD2 LOXHD1-201ENST00000300591 3970 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
NPIPA3F8WFD2 ABHD3-205ENST00000578270 2080 ntTSL 5 BASIC7.21□□□□□ -1.25
NPIPA3F8WFD2 MEF2C-221ENST00000514015 2772 ntTSL 5 BASIC7.21□□□□□ -1.25
NPIPA3F8WFD2 AC000099.1-202ENST00000413812 1912 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
NPIPA3F8WFD2 ANGPT2-203ENST00000523120 2997 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
NPIPA3F8WFD2 VIT-202ENST00000379242 2810 ntAPPRIS P3 TSL 2 BASIC7.21□□□□□ -1.25
NPIPA3F8WFD2 PRICKLE2-AS3-201ENST00000473434 2496 ntTSL 2 BASIC7.21□□□□□ -1.25
NPIPA3F8WFD2 MAP3K19-205ENST00000392917 1765 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
NPIPA3F8WFD2 FER-209ENST00000618353 1420 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
NPIPA3F8WFD2 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
NPIPA3F8WFD2 PIWIL2-205ENST00000611073 2864 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
NPIPA3F8WFD2 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC7.21□□□□□ -1.26
NPIPA3F8WFD2 U3.1-201ENST00000362500 215 ntBASIC7.21□□□□□ -1.26
NPIPA3F8WFD2 RNVU1-15-201ENST00000384476 165 ntBASIC7.21□□□□□ -1.26
NPIPA3F8WFD2 RPL5P35-201ENST00000398869 816 ntBASIC7.21□□□□□ -1.26
NPIPA3F8WFD2 SEPT7P2-202ENST00000398921 823 ntBASIC7.21□□□□□ -1.26
NPIPA3F8WFD2 AL713965.1-201ENST00000421166 230 ntTSL 5 BASIC7.21□□□□□ -1.26
NPIPA3F8WFD2 RBMY2JP-201ENST00000425544 1059 ntBASIC7.21□□□□□ -1.26
NPIPA3F8WFD2 HBBP1-201ENST00000433329 439 ntBASIC7.21□□□□□ -1.26
NPIPA3F8WFD2 PHBP4-201ENST00000437447 837 ntBASIC7.21□□□□□ -1.26
NPIPA3F8WFD2 AC002553.1-201ENST00000442828 802 ntBASIC7.21□□□□□ -1.26
NPIPA3F8WFD2 MIR4435-2HG-211ENST00000443467 826 ntTSL 3 BASIC7.21□□□□□ -1.26
NPIPA3F8WFD2 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC7.21□□□□□ -1.26
NPIPA3F8WFD2 AC093157.1-205ENST00000449473 1298 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
NPIPA3F8WFD2 LYPD6B-207ENST00000450639 484 ntAPPRIS ALT2 TSL 3 BASIC7.21□□□□□ -1.26
NPIPA3F8WFD2 AC080129.1-201ENST00000457815 406 ntTSL 3 BASIC7.21□□□□□ -1.26
NPIPA3F8WFD2 RPL7P17-201ENST00000470927 724 ntBASIC7.21□□□□□ -1.26
NPIPA3F8WFD2 RN7SL815P-201ENST00000470970 290 ntBASIC7.21□□□□□ -1.26
NPIPA3F8WFD2 AC117422.1-201ENST00000508263 379 ntTSL 3 BASIC7.21□□□□□ -1.26
NPIPA3F8WFD2 CKMT2-AS1-206ENST00000511495 585 ntTSL 4 BASIC7.21□□□□□ -1.26
NPIPA3F8WFD2 LEF1-AS1-206ENST00000512129 430 ntTSL 3 BASIC7.21□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms