Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AC120498.6-201ENST00000564700 338 ntTSL 3 BASIC8.28□□□□□ -1.08
LMO3Q8TAP4 AC007614.1-201ENST00000566607 309 ntTSL 3 BASIC8.28□□□□□ -1.08
LMO3Q8TAP4 AC008870.2-201ENST00000568262 1024 ntBASIC8.28□□□□□ -1.08
LMO3Q8TAP4 AC018521.4-201ENST00000578239 531 ntTSL 4 BASIC8.28□□□□□ -1.08
LMO3Q8TAP4 CDRT8-201ENST00000579752 467 ntTSL 3 BASIC8.28□□□□□ -1.08
LMO3Q8TAP4 ZNF561-AS1-208ENST00000592851 782 ntTSL 3 BASIC8.28□□□□□ -1.08
LMO3Q8TAP4 CARSP1-201ENST00000603171 889 ntBASIC8.28□□□□□ -1.08
LMO3Q8TAP4 AL353626.1-201ENST00000613429 507 ntTSL 5 BASIC8.28□□□□□ -1.08
LMO3Q8TAP4 pRNA.12-201ENST00000614353 90 ntBASIC8.28□□□□□ -1.08
LMO3Q8TAP4 pRNA.3-201ENST00000615048 90 ntBASIC8.28□□□□□ -1.08
LMO3Q8TAP4 UBE2Q2P6-202ENST00000617217 443 ntTSL 5 BASIC8.28□□□□□ -1.08
LMO3Q8TAP4 C5orf56-207ENST00000621237 486 ntAPPRIS P5 TSL 2 BASIC8.28□□□□□ -1.08
LMO3Q8TAP4 AC090099.1-204ENST00000623626 849 ntBASIC8.28□□□□□ -1.08
LMO3Q8TAP4 RPL36AP21-202ENST00000639134 430 ntBASIC8.28□□□□□ -1.08
LMO3Q8TAP4 AL031594.1-201ENST00000417123 1932 ntTSL 2 BASIC8.28□□□□□ -1.08
LMO3Q8TAP4 GJA1-201ENST00000282561 3037 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
LMO3Q8TAP4 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
LMO3Q8TAP4 SLC17A3-203ENST00000361703 1543 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
LMO3Q8TAP4 ZNF667-208ENST00000629654 3265 ntTSL 5 BASIC8.28□□□□□ -1.08
LMO3Q8TAP4 CYP4A11-201ENST00000310638 2530 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
LMO3Q8TAP4 DNAH11-202ENST00000409508 14167 ntAPPRIS P2 TSL 5 BASIC8.28□□□□□ -1.08
LMO3Q8TAP4 IL22RA2-201ENST00000296980 2886 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
LMO3Q8TAP4 PLXDC2-203ENST00000377252 12468 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
LMO3Q8TAP4 CFAP61-210ENST00000451767 1946 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
LMO3Q8TAP4 ARPP21-221ENST00000444190 3182 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
LMO3Q8TAP4 OR7E11P-202ENST00000642027 1491 ntBASIC8.27□□□□□ -1.09
LMO3Q8TAP4 FLNB-212ENST00000490882 8079 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
LMO3Q8TAP4 MBTPS2-201ENST00000365779 4457 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
LMO3Q8TAP4 FNDC3A-206ENST00000541916 6328 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
LMO3Q8TAP4 AL034372.1-201ENST00000407586 754 ntBASIC8.27□□□□□ -1.09
LMO3Q8TAP4 GAS8-AS1-201ENST00000408886 435 ntBASIC8.27□□□□□ -1.09
LMO3Q8TAP4 AL451048.1-201ENST00000413328 217 ntTSL 3 BASIC8.27□□□□□ -1.09
LMO3Q8TAP4 OR10U1P-201ENST00000414690 905 ntBASIC8.27□□□□□ -1.09
LMO3Q8TAP4 AC006017.1-201ENST00000424630 673 ntTSL 3 BASIC8.27□□□□□ -1.09
LMO3Q8TAP4 AL590682.1-201ENST00000437248 344 ntBASIC8.27□□□□□ -1.09
LMO3Q8TAP4 AC009955.1-201ENST00000455896 271 ntTSL 5 BASIC8.27□□□□□ -1.09
LMO3Q8TAP4 ASPA-202ENST00000456349 1090 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
LMO3Q8TAP4 AL035660.2-201ENST00000461248 556 ntTSL 2 BASIC8.27□□□□□ -1.09
LMO3Q8TAP4 LINC02010-201ENST00000470860 516 ntTSL 4 BASIC8.27□□□□□ -1.09
LMO3Q8TAP4 RN7SL861P-201ENST00000473793 285 ntBASIC8.27□□□□□ -1.09
LMO3Q8TAP4 AC026254.1-201ENST00000479473 431 ntBASIC8.27□□□□□ -1.09
LMO3Q8TAP4 RN7SL608P-201ENST00000492377 279 ntBASIC8.27□□□□□ -1.09
LMO3Q8TAP4 AC109811.2-201ENST00000509609 452 ntBASIC8.27□□□□□ -1.09
LMO3Q8TAP4 SCARNA20.1-201ENST00000516009 138 ntBASIC8.27□□□□□ -1.09
LMO3Q8TAP4 AC005154.1-225ENST00000581665 564 ntTSL 4 BASIC8.27□□□□□ -1.09
LMO3Q8TAP4 AC060766.6-201ENST00000589099 394 ntTSL 3 BASIC8.27□□□□□ -1.09
LMO3Q8TAP4 AL390037.1-201ENST00000610918 431 ntTSL 3 BASIC8.27□□□□□ -1.09
LMO3Q8TAP4 MIR6745-201ENST00000612694 127 ntBASIC8.27□□□□□ -1.09
LMO3Q8TAP4 AL157392.3-206ENST00000614899 822 ntTSL 5 BASIC8.27□□□□□ -1.09
LMO3Q8TAP4 AL353608.4-201ENST00000624487 1188 ntBASIC8.27□□□□□ -1.09
LMO3Q8TAP4 SCML1-203ENST00000380045 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
LMO3Q8TAP4 USP32P2-201ENST00000412260 4329 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
LMO3Q8TAP4 MRRF-202ENST00000344641 9826 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
LMO3Q8TAP4 FSTL5-203ENST00000427802 2920 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
LMO3Q8TAP4 TPD52-202ENST00000379097 2563 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
LMO3Q8TAP4 ACTR6-202ENST00000546902 1877 ntTSL 2 BASIC8.27□□□□□ -1.09
LMO3Q8TAP4 ASCC1-201ENST00000317126 1501 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
LMO3Q8TAP4 SHROOM4-203ENST00000460112 8919 ntTSL 5 BASIC8.27□□□□□ -1.09
LMO3Q8TAP4 DDX3Y-202ENST00000360160 2709 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
LMO3Q8TAP4 A1CF-201ENST00000282641 9350 ntAPPRIS ALT1 TSL 2 BASIC8.27□□□□□ -1.09
LMO3Q8TAP4 AC092979.1-201ENST00000488190 1414 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
LMO3Q8TAP4 GTF2A1-203ENST00000553612 6306 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
LMO3Q8TAP4 PKP4-AS1-201ENST00000342892 4067 ntTSL 2 BASIC8.27□□□□□ -1.09
LMO3Q8TAP4 WDR7-213ENST00000615645 5257 ntTSL 5 BASIC8.27□□□□□ -1.09
LMO3Q8TAP4 SYNJ1-201ENST00000357345 7059 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
LMO3Q8TAP4 SYNJ1-203ENST00000382499 7094 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
LMO3Q8TAP4 PPFIA2-220ENST00000550584 5405 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
LMO3Q8TAP4 AL121722.1-201ENST00000638550 4849 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
LMO3Q8TAP4 COX7C-203ENST00000509578 1584 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.09
LMO3Q8TAP4 MS4A6A-208ENST00000528851 1806 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
LMO3Q8TAP4 MAP4K4-203ENST00000347699 3792 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
LMO3Q8TAP4 WDR89-204ENST00000620954 2935 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
LMO3Q8TAP4 ZMYND8-207ENST00000396281 5511 ntAPPRIS ALT2 TSL 2 BASIC8.26□□□□□ -1.09
LMO3Q8TAP4 ALG8-221ENST00000615266 1469 ntTSL 5 BASIC8.26□□□□□ -1.09
LMO3Q8TAP4 TRPS1-208ENST00000519076 3329 ntTSL 5 BASIC8.26□□□□□ -1.09
LMO3Q8TAP4 RUNX1T1-250ENST00000614812 7483 ntAPPRIS P3 TSL 5 BASIC8.26□□□□□ -1.09
LMO3Q8TAP4 SPHKAP-202ENST00000392056 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
LMO3Q8TAP4 PSG5-202ENST00000366175 1766 ntTSL 5 BASIC8.26□□□□□ -1.09
LMO3Q8TAP4 PRLR-202ENST00000310101 1297 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
LMO3Q8TAP4 OR5P3-201ENST00000328375 936 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
LMO3Q8TAP4 PSMD10-203ENST00000340200 713 ntTSL 3 BASIC8.26□□□□□ -1.09
LMO3Q8TAP4 RPSAP72-201ENST00000407020 358 ntBASIC8.26□□□□□ -1.09
LMO3Q8TAP4 AC073367.1-201ENST00000421480 697 ntTSL 2 BASIC8.26□□□□□ -1.09
LMO3Q8TAP4 AC092066.1-201ENST00000425131 317 ntBASIC8.26□□□□□ -1.09
LMO3Q8TAP4 AC092167.1-201ENST00000435466 495 ntTSL 4 BASIC8.26□□□□□ -1.09
LMO3Q8TAP4 LINC01805-201ENST00000436433 572 ntTSL 5 BASIC8.26□□□□□ -1.09
LMO3Q8TAP4 AC245047.5-201ENST00000437312 556 ntBASIC8.26□□□□□ -1.09
LMO3Q8TAP4 TTC21B-AS1-202ENST00000443032 544 ntTSL 4 BASIC8.26□□□□□ -1.09
LMO3Q8TAP4 SLC8A1-AS1-207ENST00000444629 935 ntTSL 3 BASIC8.26□□□□□ -1.09
LMO3Q8TAP4 YWHABP1-201ENST00000445359 727 ntBASIC8.26□□□□□ -1.09
LMO3Q8TAP4 RPL10P6-201ENST00000457497 318 ntBASIC8.26□□□□□ -1.09
LMO3Q8TAP4 AC011005.4-201ENST00000466717 535 ntTSL 3 BASIC8.26□□□□□ -1.09
LMO3Q8TAP4 AC079768.1-201ENST00000503181 711 ntBASIC8.26□□□□□ -1.09
LMO3Q8TAP4 AC025180.1-201ENST00000505701 595 ntTSL 4 BASIC8.26□□□□□ -1.09
LMO3Q8TAP4 AF186996.3-201ENST00000509527 964 ntBASIC8.26□□□□□ -1.09
LMO3Q8TAP4 LINC01608-202ENST00000524283 561 ntTSL 4 BASIC8.26□□□□□ -1.09
LMO3Q8TAP4 WASF2-201ENST00000536657 1083 ntTSL 2 BASIC8.26□□□□□ -1.09
LMO3Q8TAP4 NIFKP4-201ENST00000567275 1192 ntBASIC8.26□□□□□ -1.09
LMO3Q8TAP4 SPINT1-AS1-204ENST00000568419 629 ntTSL 3 BASIC8.26□□□□□ -1.09
LMO3Q8TAP4 STX8-209ENST00000574431 731 ntTSL 3 BASIC8.26□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms