Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 DCAF6-202ENST00000367840 3349 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
NPIPA3F8WFD2 AC003684.1-201ENST00000432442 1715 ntTSL 2 BASIC7.24□□□□□ -1.25
NPIPA3F8WFD2 TNS4-201ENST00000254051 4067 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
NPIPA3F8WFD2 ZMAT4-201ENST00000297737 2466 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
NPIPA3F8WFD2 PTER-203ENST00000423462 3212 ntTSL 3 BASIC7.24□□□□□ -1.25
NPIPA3F8WFD2 NLRP3-203ENST00000366496 3996 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
NPIPA3F8WFD2 FHL1-206ENST00000394153 2374 ntTSL 5 BASIC7.24□□□□□ -1.25
NPIPA3F8WFD2 PIGN-225ENST00000638435 4382 ntTSL 5 BASIC7.24□□□□□ -1.25
NPIPA3F8WFD2 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
NPIPA3F8WFD2 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
NPIPA3F8WFD2 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
NPIPA3F8WFD2 AOX2P-204ENST00000487742 3284 ntBASIC7.24□□□□□ -1.25
NPIPA3F8WFD2 AC108099.1-201ENST00000564402 3258 ntBASIC7.24□□□□□ -1.25
NPIPA3F8WFD2 USP48-203ENST00000374732 3037 ntTSL 2 BASIC7.24□□□□□ -1.25
NPIPA3F8WFD2 ZNF430-203ENST00000595401 3021 ntTSL 2 BASIC7.24□□□□□ -1.25
NPIPA3F8WFD2 AC004947.1-201ENST00000420912 2781 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
NPIPA3F8WFD2 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
NPIPA3F8WFD2 TRBV5-3-201ENST00000390362 343 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
NPIPA3F8WFD2 RNA5SP297-201ENST00000391029 113 ntBASIC7.24□□□□□ -1.25
NPIPA3F8WFD2 LINC01066-201ENST00000415283 399 ntTSL 3 BASIC7.24□□□□□ -1.25
NPIPA3F8WFD2 CRIP1P3-201ENST00000416794 220 ntBASIC7.24□□□□□ -1.25
NPIPA3F8WFD2 AC017104.2-201ENST00000417000 321 ntBASIC7.24□□□□□ -1.25
NPIPA3F8WFD2 AL445524.1-205ENST00000425412 392 ntTSL 2 BASIC7.24□□□□□ -1.25
NPIPA3F8WFD2 AC007879.1-201ENST00000435643 554 ntTSL 4 BASIC7.24□□□□□ -1.25
NPIPA3F8WFD2 TRIM2-203ENST00000437508 3832 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
NPIPA3F8WFD2 GPR141-202ENST00000447769 1270 ntAPPRIS P1 TSL 3 BASIC7.24□□□□□ -1.25
NPIPA3F8WFD2 AC239798.1-201ENST00000449024 1176 ntBASIC7.24□□□□□ -1.25
NPIPA3F8WFD2 AL451074.1-202ENST00000453762 989 ntBASIC7.24□□□□□ -1.25
NPIPA3F8WFD2 OR2M3-201ENST00000456743 1061 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
NPIPA3F8WFD2 BX890604.1-206ENST00000471090 922 ntTSL 3 BASIC7.24□□□□□ -1.25
NPIPA3F8WFD2 RN7SL12P-201ENST00000473849 290 ntBASIC7.24□□□□□ -1.25
NPIPA3F8WFD2 ALG13-214ENST00000482742 620 ntTSL 2 BASIC7.24□□□□□ -1.25
NPIPA3F8WFD2 DLX5-202ENST00000486603 1074 ntTSL 2 BASIC7.24□□□□□ -1.25
NPIPA3F8WFD2 CSF2RA-217ENST00000494969 489 ntTSL 5 BASIC7.24□□□□□ -1.25
NPIPA3F8WFD2 RN7SL445P-201ENST00000495609 293 ntBASIC7.24□□□□□ -1.25
NPIPA3F8WFD2 MLIP-209ENST00000509997 1032 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
NPIPA3F8WFD2 AC068898.2-201ENST00000514425 597 ntTSL 4 BASIC7.24□□□□□ -1.25
NPIPA3F8WFD2 IGHVIII-67-3-201ENST00000517650 232 ntBASIC7.24□□□□□ -1.25
NPIPA3F8WFD2 AC011726.3-201ENST00000518031 568 ntTSL 4 BASIC7.24□□□□□ -1.25
NPIPA3F8WFD2 OR4A7P-201ENST00000531463 910 ntBASIC7.24□□□□□ -1.25
NPIPA3F8WFD2 AC027020.1-202ENST00000557839 429 ntTSL 5 BASIC7.24□□□□□ -1.25
NPIPA3F8WFD2 KCTD2-206ENST00000581589 993 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
NPIPA3F8WFD2 TEX26-AS1-211ENST00000589840 865 ntTSL 5 BASIC7.24□□□□□ -1.25
NPIPA3F8WFD2 CT45A3-202ENST00000598716 855 ntAPPRIS P1 TSL 3 BASIC7.24□□□□□ -1.25
NPIPA3F8WFD2 AC243772.3-202ENST00000609662 1148 ntBASIC7.24□□□□□ -1.25
NPIPA3F8WFD2 MIR6745-201ENST00000612694 127 ntBASIC7.24□□□□□ -1.25
NPIPA3F8WFD2 AL355306.2-203ENST00000635102 1025 ntTSL 5 BASIC7.24□□□□□ -1.25
NPIPA3F8WFD2 AC241585.4-201ENST00000640951 686 ntBASIC7.24□□□□□ -1.25
NPIPA3F8WFD2 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
NPIPA3F8WFD2 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
NPIPA3F8WFD2 C6orf89-202ENST00000359359 2565 ntTSL 5 BASIC7.24□□□□□ -1.25
NPIPA3F8WFD2 PDIK1L-201ENST00000374269 2566 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
NPIPA3F8WFD2 RAD51B-211ENST00000487861 1673 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
NPIPA3F8WFD2 AC020549.1-201ENST00000536916 1440 ntBASIC7.24□□□□□ -1.25
NPIPA3F8WFD2 EFCAB1-201ENST00000262103 2051 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
NPIPA3F8WFD2 ST5-237ENST00000530991 3396 ntTSL 2 BASIC7.24□□□□□ -1.25
NPIPA3F8WFD2 GBP7-201ENST00000294671 2454 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
NPIPA3F8WFD2 CLRN1-AS1-202ENST00000476886 2223 ntTSL 2 BASIC7.24□□□□□ -1.25
NPIPA3F8WFD2 RAD51B-212ENST00000488612 1550 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
NPIPA3F8WFD2 PARP1P1-201ENST00000413631 3026 ntBASIC7.24□□□□□ -1.25
NPIPA3F8WFD2 C7-201ENST00000313164 4257 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
NPIPA3F8WFD2 AC079061.1-201ENST00000499579 3075 ntTSL 2 BASIC7.24□□□□□ -1.25
NPIPA3F8WFD2 FBXO36-201ENST00000283946 2810 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
NPIPA3F8WFD2 ZNF846-202ENST00000586293 1621 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
NPIPA3F8WFD2 RNF24-203ENST00000432261 3149 ntTSL 5 BASIC7.23□□□□□ -1.25
NPIPA3F8WFD2 ZNF438-203ENST00000375311 2173 ntAPPRIS ALT2 TSL 2 BASIC7.23□□□□□ -1.25
NPIPA3F8WFD2 CDK15-202ENST00000410091 1780 ntAPPRIS P3 TSL 2 BASIC7.23□□□□□ -1.25
NPIPA3F8WFD2 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
NPIPA3F8WFD2 DDX24-205ENST00000555054 2769 ntTSL 5 BASIC7.23□□□□□ -1.25
NPIPA3F8WFD2 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC7.23□□□□□ -1.25
NPIPA3F8WFD2 SELENOT-202ENST00000471696 3469 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
NPIPA3F8WFD2 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
NPIPA3F8WFD2 ABLIM1-205ENST00000369266 2230 ntTSL 5 BASIC7.23□□□□□ -1.25
NPIPA3F8WFD2 ZNF300P1-201ENST00000356555 1822 ntBASIC7.23□□□□□ -1.25
NPIPA3F8WFD2 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC7.23□□□□□ -1.25
NPIPA3F8WFD2 MARF1-201ENST00000396368 7743 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
NPIPA3F8WFD2 PICALM-201ENST00000356360 1958 ntTSL 5 BASIC7.23□□□□□ -1.25
NPIPA3F8WFD2 FCGR3B-209ENST00000614870 1993 ntTSL 5 BASIC7.23□□□□□ -1.25
NPIPA3F8WFD2 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
NPIPA3F8WFD2 PAGE4-201ENST00000218068 499 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
NPIPA3F8WFD2 TTC9C-202ENST00000316461 1080 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
NPIPA3F8WFD2 GPX2-201ENST00000389614 990 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
NPIPA3F8WFD2 LSM5-202ENST00000409292 538 ntTSL 2 BASIC7.23□□□□□ -1.25
NPIPA3F8WFD2 RN7SKP26-201ENST00000410247 293 ntBASIC7.23□□□□□ -1.25
NPIPA3F8WFD2 AC010983.1-201ENST00000418387 1028 ntTSL 5 BASIC7.23□□□□□ -1.25
NPIPA3F8WFD2 RPL6P21-201ENST00000418672 846 ntBASIC7.23□□□□□ -1.25
NPIPA3F8WFD2 AC009228.1-203ENST00000430105 432 ntTSL 3 BASIC7.23□□□□□ -1.25
NPIPA3F8WFD2 AL606752.1-201ENST00000435442 666 ntBASIC7.23□□□□□ -1.25
NPIPA3F8WFD2 AL135908.1-202ENST00000454135 562 ntTSL 2 BASIC7.23□□□□□ -1.25
NPIPA3F8WFD2 SNRPD2P1-201ENST00000489253 354 ntBASIC7.23□□□□□ -1.25
NPIPA3F8WFD2 UGT2B29P-201ENST00000509021 973 ntBASIC7.23□□□□□ -1.25
NPIPA3F8WFD2 NR3C2-207ENST00000511528 2967 ntTSL 5 BASIC7.23□□□□□ -1.25
NPIPA3F8WFD2 LINC00958-202ENST00000526388 607 ntTSL 2 BASIC7.23□□□□□ -1.25
NPIPA3F8WFD2 AC090607.2-201ENST00000560331 695 ntBASIC7.23□□□□□ -1.25
NPIPA3F8WFD2 Metazoa_SRP.123-201ENST00000616695 286 ntBASIC7.23□□□□□ -1.25
NPIPA3F8WFD2 IL13-206ENST00000617259 498 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
NPIPA3F8WFD2 AP001442.1-201ENST00000617755 659 ntTSL 5 BASIC7.23□□□□□ -1.25
NPIPA3F8WFD2 SLC8A1-AS1-228ENST00000627210 225 ntTSL 5 BASIC7.23□□□□□ -1.25
NPIPA3F8WFD2 PCBP1-AS1-322ENST00000628147 553 ntTSL 5 BASIC7.23□□□□□ -1.25
NPIPA3F8WFD2 CAP1-201ENST00000340450 2592 ntAPPRIS ALT1 TSL 5 BASIC7.23□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms