Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 KRT18P20-201ENST00000548986 1279 ntBASIC24.12■■□□□ 1.45
DDX49Q9Y6V7 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC24.12■■□□□ 1.45
DDX49Q9Y6V7 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
DDX49Q9Y6V7 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
DDX49Q9Y6V7 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
DDX49Q9Y6V7 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
DDX49Q9Y6V7 AC007225.1-201ENST00000566331 1836 ntBASIC24.12■■□□□ 1.45
DDX49Q9Y6V7 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
DDX49Q9Y6V7 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
DDX49Q9Y6V7 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
DDX49Q9Y6V7 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
DDX49Q9Y6V7 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC24.11■■□□□ 1.45
DDX49Q9Y6V7 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
DDX49Q9Y6V7 AC121338.2-201ENST00000622535 1744 ntBASIC24.11■■□□□ 1.45
DDX49Q9Y6V7 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC24.11■■□□□ 1.45
DDX49Q9Y6V7 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC24.11■■□□□ 1.45
DDX49Q9Y6V7 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC24.11■■□□□ 1.45
DDX49Q9Y6V7 CYP2T1P-201ENST00000432607 1285 ntBASIC24.11■■□□□ 1.45
DDX49Q9Y6V7 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC24.11■■□□□ 1.45
DDX49Q9Y6V7 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC24.11■■□□□ 1.45
DDX49Q9Y6V7 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
DDX49Q9Y6V7 USP39-204ENST00000409766 2033 ntTSL 2 BASIC24.11■■□□□ 1.45
DDX49Q9Y6V7 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
DDX49Q9Y6V7 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
DDX49Q9Y6V7 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
DDX49Q9Y6V7 DET1-207ENST00000564406 2315 ntTSL 2 BASIC24.11■■□□□ 1.45
DDX49Q9Y6V7 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
DDX49Q9Y6V7 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC24.11■■□□□ 1.45
DDX49Q9Y6V7 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC24.11■■□□□ 1.45
DDX49Q9Y6V7 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
DDX49Q9Y6V7 AC069152.1-201ENST00000438030 544 ntBASIC24.1■■□□□ 1.45
DDX49Q9Y6V7 AC093787.1-201ENST00000450396 207 ntBASIC24.1■■□□□ 1.45
DDX49Q9Y6V7 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
DDX49Q9Y6V7 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
DDX49Q9Y6V7 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
DDX49Q9Y6V7 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
DDX49Q9Y6V7 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
DDX49Q9Y6V7 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
DDX49Q9Y6V7 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
DDX49Q9Y6V7 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC24.1■■□□□ 1.45
DDX49Q9Y6V7 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
DDX49Q9Y6V7 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC24.1■■□□□ 1.45
DDX49Q9Y6V7 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC24.1■■□□□ 1.45
DDX49Q9Y6V7 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
DDX49Q9Y6V7 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
DDX49Q9Y6V7 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
DDX49Q9Y6V7 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC24.09■■□□□ 1.45
DDX49Q9Y6V7 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
DDX49Q9Y6V7 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
DDX49Q9Y6V7 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC24.09■■□□□ 1.45
DDX49Q9Y6V7 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
DDX49Q9Y6V7 SLC29A4P1-201ENST00000398760 971 ntBASIC24.09■■□□□ 1.45
DDX49Q9Y6V7 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
DDX49Q9Y6V7 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
DDX49Q9Y6V7 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC24.09■■□□□ 1.45
DDX49Q9Y6V7 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC24.09■■□□□ 1.45
DDX49Q9Y6V7 KRT18P6-201ENST00000555540 1265 ntBASIC24.09■■□□□ 1.45
DDX49Q9Y6V7 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC24.09■■□□□ 1.45
DDX49Q9Y6V7 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC24.09■■□□□ 1.45
DDX49Q9Y6V7 PFKL-212ENST00000628044 129 ntTSL 3 BASIC24.09■■□□□ 1.45
DDX49Q9Y6V7 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
DDX49Q9Y6V7 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
DDX49Q9Y6V7 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
DDX49Q9Y6V7 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC24.08■■□□□ 1.45
DDX49Q9Y6V7 AC061975.6-201ENST00000579045 1553 ntBASIC24.08■■□□□ 1.45
DDX49Q9Y6V7 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
DDX49Q9Y6V7 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
DDX49Q9Y6V7 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
DDX49Q9Y6V7 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
DDX49Q9Y6V7 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
DDX49Q9Y6V7 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC24.08■■□□□ 1.45
DDX49Q9Y6V7 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
DDX49Q9Y6V7 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.45
DDX49Q9Y6V7 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
DDX49Q9Y6V7 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
DDX49Q9Y6V7 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
DDX49Q9Y6V7 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
DDX49Q9Y6V7 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
DDX49Q9Y6V7 AL512408.1-201ENST00000569378 2000 ntBASIC24.08■■□□□ 1.44
DDX49Q9Y6V7 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.44
DDX49Q9Y6V7 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
DDX49Q9Y6V7 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
DDX49Q9Y6V7 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC24.07■■□□□ 1.44
DDX49Q9Y6V7 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
DDX49Q9Y6V7 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC24.07■■□□□ 1.44
DDX49Q9Y6V7 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC24.07■■□□□ 1.44
DDX49Q9Y6V7 RNF146-206ENST00000480444 843 ntTSL 2 BASIC24.07■■□□□ 1.44
DDX49Q9Y6V7 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC24.07■■□□□ 1.44
DDX49Q9Y6V7 PHB2-213ENST00000546111 858 ntTSL 2 BASIC24.07■■□□□ 1.44
DDX49Q9Y6V7 AC133552.2-202ENST00000575694 574 ntBASIC24.07■■□□□ 1.44
DDX49Q9Y6V7 MARS-234ENST00000630571 216 ntTSL 5 BASIC24.07■■□□□ 1.44
DDX49Q9Y6V7 MARS-235ENST00000630803 183 ntTSL 3 BASIC24.07■■□□□ 1.44
DDX49Q9Y6V7 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
DDX49Q9Y6V7 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC24.07■■□□□ 1.44
DDX49Q9Y6V7 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
DDX49Q9Y6V7 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
DDX49Q9Y6V7 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
DDX49Q9Y6V7 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
DDX49Q9Y6V7 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
DDX49Q9Y6V7 NARF-205ENST00000412079 1760 ntTSL 5 BASIC24.06■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms