Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
DNMT3AQ9Y6K1 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
DNMT3AQ9Y6K1 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
DNMT3AQ9Y6K1 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
DNMT3AQ9Y6K1 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.77■□□□□ 0.76
DNMT3AQ9Y6K1 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.77■□□□□ 0.76
DNMT3AQ9Y6K1 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.77■□□□□ 0.76
DNMT3AQ9Y6K1 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.77■□□□□ 0.76
DNMT3AQ9Y6K1 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
DNMT3AQ9Y6K1 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
DNMT3AQ9Y6K1 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.77■□□□□ 0.76
DNMT3AQ9Y6K1 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
DNMT3AQ9Y6K1 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
DNMT3AQ9Y6K1 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
DNMT3AQ9Y6K1 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
DNMT3AQ9Y6K1 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
DNMT3AQ9Y6K1 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
DNMT3AQ9Y6K1 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
DNMT3AQ9Y6K1 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
DNMT3AQ9Y6K1 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
DNMT3AQ9Y6K1 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.76■□□□□ 0.75
DNMT3AQ9Y6K1 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.76■□□□□ 0.75
DNMT3AQ9Y6K1 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
DNMT3AQ9Y6K1 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.76■□□□□ 0.75
DNMT3AQ9Y6K1 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
DNMT3AQ9Y6K1 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
DNMT3AQ9Y6K1 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
DNMT3AQ9Y6K1 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
DNMT3AQ9Y6K1 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
DNMT3AQ9Y6K1 HLA-G-202ENST00000376815 851 ntBASIC19.76■□□□□ 0.75
DNMT3AQ9Y6K1 HLA-G-203ENST00000376818 1127 ntBASIC19.76■□□□□ 0.75
DNMT3AQ9Y6K1 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.76■□□□□ 0.75
DNMT3AQ9Y6K1 UNC93B4-201ENST00000505679 747 ntBASIC19.76■□□□□ 0.75
DNMT3AQ9Y6K1 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
DNMT3AQ9Y6K1 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.76■□□□□ 0.75
DNMT3AQ9Y6K1 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
DNMT3AQ9Y6K1 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
DNMT3AQ9Y6K1 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.76■□□□□ 0.75
DNMT3AQ9Y6K1 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
DNMT3AQ9Y6K1 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.76■□□□□ 0.75
DNMT3AQ9Y6K1 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
DNMT3AQ9Y6K1 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
DNMT3AQ9Y6K1 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
DNMT3AQ9Y6K1 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
DNMT3AQ9Y6K1 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.76■□□□□ 0.75
DNMT3AQ9Y6K1 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
DNMT3AQ9Y6K1 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.75■□□□□ 0.75
DNMT3AQ9Y6K1 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
DNMT3AQ9Y6K1 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
DNMT3AQ9Y6K1 AC026366.1-201ENST00000488803 879 ntBASIC19.75■□□□□ 0.75
DNMT3AQ9Y6K1 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.75■□□□□ 0.75
DNMT3AQ9Y6K1 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.75■□□□□ 0.75
DNMT3AQ9Y6K1 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
DNMT3AQ9Y6K1 PTBP1P-201ENST00000554374 1601 ntBASIC19.75■□□□□ 0.75
DNMT3AQ9Y6K1 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
DNMT3AQ9Y6K1 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.75■□□□□ 0.75
DNMT3AQ9Y6K1 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
DNMT3AQ9Y6K1 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
DNMT3AQ9Y6K1 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
DNMT3AQ9Y6K1 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.74■□□□□ 0.75
DNMT3AQ9Y6K1 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.74■□□□□ 0.75
DNMT3AQ9Y6K1 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
DNMT3AQ9Y6K1 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.74■□□□□ 0.75
DNMT3AQ9Y6K1 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
DNMT3AQ9Y6K1 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.74■□□□□ 0.75
DNMT3AQ9Y6K1 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
DNMT3AQ9Y6K1 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
DNMT3AQ9Y6K1 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.74■□□□□ 0.75
DNMT3AQ9Y6K1 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.74■□□□□ 0.75
DNMT3AQ9Y6K1 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.74■□□□□ 0.75
DNMT3AQ9Y6K1 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
DNMT3AQ9Y6K1 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
DNMT3AQ9Y6K1 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.74■□□□□ 0.75
DNMT3AQ9Y6K1 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
DNMT3AQ9Y6K1 KRT8P20-201ENST00000423953 1409 ntBASIC19.74■□□□□ 0.75
DNMT3AQ9Y6K1 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
DNMT3AQ9Y6K1 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
DNMT3AQ9Y6K1 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
DNMT3AQ9Y6K1 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
DNMT3AQ9Y6K1 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.73■□□□□ 0.75
DNMT3AQ9Y6K1 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.73■□□□□ 0.75
DNMT3AQ9Y6K1 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
DNMT3AQ9Y6K1 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.73■□□□□ 0.75
DNMT3AQ9Y6K1 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
DNMT3AQ9Y6K1 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
DNMT3AQ9Y6K1 AP003097.1-201ENST00000530657 1135 ntBASIC19.73■□□□□ 0.75
DNMT3AQ9Y6K1 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
DNMT3AQ9Y6K1 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.73■□□□□ 0.75
DNMT3AQ9Y6K1 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
DNMT3AQ9Y6K1 AL031963.3-201ENST00000606441 850 ntBASIC19.73■□□□□ 0.75
DNMT3AQ9Y6K1 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
DNMT3AQ9Y6K1 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
DNMT3AQ9Y6K1 KRT8P17-201ENST00000453110 1448 ntBASIC19.73■□□□□ 0.75
DNMT3AQ9Y6K1 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
DNMT3AQ9Y6K1 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
DNMT3AQ9Y6K1 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
DNMT3AQ9Y6K1 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
DNMT3AQ9Y6K1 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
DNMT3AQ9Y6K1 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
DNMT3AQ9Y6K1 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms