Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN16Q9Y5I7 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN16Q9Y5I7 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.81■□□□□ 0.6
CLDN16Q9Y5I7 LINC01006-201ENST00000333319 2292 ntBASIC18.81■□□□□ 0.6
CLDN16Q9Y5I7 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.81■□□□□ 0.6
CLDN16Q9Y5I7 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.81■□□□□ 0.6
CLDN16Q9Y5I7 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.81■□□□□ 0.6
CLDN16Q9Y5I7 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.81■□□□□ 0.6
CLDN16Q9Y5I7 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN16Q9Y5I7 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN16Q9Y5I7 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN16Q9Y5I7 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.81■□□□□ 0.6
CLDN16Q9Y5I7 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.81■□□□□ 0.6
CLDN16Q9Y5I7 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN16Q9Y5I7 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.81■□□□□ 0.6
CLDN16Q9Y5I7 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN16Q9Y5I7 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.81■□□□□ 0.6
CLDN16Q9Y5I7 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.81■□□□□ 0.6
CLDN16Q9Y5I7 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN16Q9Y5I7 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN16Q9Y5I7 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN16Q9Y5I7 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN16Q9Y5I7 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN16Q9Y5I7 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN16Q9Y5I7 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN16Q9Y5I7 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN16Q9Y5I7 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CLDN16Q9Y5I7 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN16Q9Y5I7 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CLDN16Q9Y5I7 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN16Q9Y5I7 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CLDN16Q9Y5I7 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN16Q9Y5I7 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN16Q9Y5I7 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN16Q9Y5I7 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.8■□□□□ 0.6
CLDN16Q9Y5I7 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN16Q9Y5I7 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.8■□□□□ 0.6
CLDN16Q9Y5I7 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CLDN16Q9Y5I7 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
CLDN16Q9Y5I7 TSPY20P-201ENST00000450910 630 ntBASIC18.8■□□□□ 0.6
CLDN16Q9Y5I7 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN16Q9Y5I7 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN16Q9Y5I7 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN16Q9Y5I7 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.8■□□□□ 0.6
CLDN16Q9Y5I7 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN16Q9Y5I7 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN16Q9Y5I7 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
CLDN16Q9Y5I7 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.8■□□□□ 0.6
CLDN16Q9Y5I7 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN16Q9Y5I7 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN16Q9Y5I7 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CLDN16Q9Y5I7 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN16Q9Y5I7 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN16Q9Y5I7 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CLDN16Q9Y5I7 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN16Q9Y5I7 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CLDN16Q9Y5I7 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.79■□□□□ 0.6
CLDN16Q9Y5I7 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN16Q9Y5I7 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN16Q9Y5I7 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.79■□□□□ 0.6
CLDN16Q9Y5I7 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN16Q9Y5I7 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN16Q9Y5I7 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.79■□□□□ 0.6
CLDN16Q9Y5I7 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN16Q9Y5I7 ABHD17AP1-201ENST00000358206 933 ntBASIC18.79■□□□□ 0.6
CLDN16Q9Y5I7 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN16Q9Y5I7 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.79■□□□□ 0.6
CLDN16Q9Y5I7 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.79■□□□□ 0.6
CLDN16Q9Y5I7 UNC93B4-201ENST00000505679 747 ntBASIC18.79■□□□□ 0.6
CLDN16Q9Y5I7 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.79■□□□□ 0.6
CLDN16Q9Y5I7 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.79■□□□□ 0.6
CLDN16Q9Y5I7 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.79■□□□□ 0.6
CLDN16Q9Y5I7 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.79■□□□□ 0.6
CLDN16Q9Y5I7 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CLDN16Q9Y5I7 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN16Q9Y5I7 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN16Q9Y5I7 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN16Q9Y5I7 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN16Q9Y5I7 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.78■□□□□ 0.6
CLDN16Q9Y5I7 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CLDN16Q9Y5I7 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN16Q9Y5I7 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN16Q9Y5I7 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN16Q9Y5I7 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.78■□□□□ 0.6
CLDN16Q9Y5I7 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.78■□□□□ 0.6
CLDN16Q9Y5I7 AC026366.1-201ENST00000488803 879 ntBASIC18.78■□□□□ 0.6
CLDN16Q9Y5I7 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN16Q9Y5I7 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.78■□□□□ 0.6
CLDN16Q9Y5I7 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN16Q9Y5I7 SOX15-203ENST00000570788 1093 ntBASIC18.78■□□□□ 0.6
CLDN16Q9Y5I7 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.78■□□□□ 0.6
CLDN16Q9Y5I7 AL031963.3-201ENST00000606441 850 ntBASIC18.78■□□□□ 0.6
CLDN16Q9Y5I7 AC006557.6-201ENST00000623071 864 ntBASIC18.78■□□□□ 0.6
CLDN16Q9Y5I7 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.78■□□□□ 0.6
CLDN16Q9Y5I7 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN16Q9Y5I7 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.78■□□□□ 0.6
CLDN16Q9Y5I7 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN16Q9Y5I7 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.77■□□□□ 0.6
CLDN16Q9Y5I7 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN16Q9Y5I7 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms