Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
PCDHB1Q9Y5F3 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHB1Q9Y5F3 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.17■□□□□ 0.82
PCDHB1Q9Y5F3 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.17■□□□□ 0.82
PCDHB1Q9Y5F3 AC087633.2-202ENST00000565166 1439 ntBASIC20.17■□□□□ 0.82
PCDHB1Q9Y5F3 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.17■□□□□ 0.82
PCDHB1Q9Y5F3 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
PCDHB1Q9Y5F3 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHB1Q9Y5F3 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHB1Q9Y5F3 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHB1Q9Y5F3 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHB1Q9Y5F3 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHB1Q9Y5F3 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.16■□□□□ 0.82
PCDHB1Q9Y5F3 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHB1Q9Y5F3 AC026366.1-201ENST00000488803 879 ntBASIC20.16■□□□□ 0.82
PCDHB1Q9Y5F3 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.16■□□□□ 0.82
PCDHB1Q9Y5F3 UNC93B4-201ENST00000505679 747 ntBASIC20.16■□□□□ 0.82
PCDHB1Q9Y5F3 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.16■□□□□ 0.82
PCDHB1Q9Y5F3 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
PCDHB1Q9Y5F3 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.16■□□□□ 0.82
PCDHB1Q9Y5F3 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
PCDHB1Q9Y5F3 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.16■□□□□ 0.82
PCDHB1Q9Y5F3 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHB1Q9Y5F3 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHB1Q9Y5F3 AC073648.6-201ENST00000641589 218 ntBASIC20.16■□□□□ 0.82
PCDHB1Q9Y5F3 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHB1Q9Y5F3 CYP21A1P-202ENST00000354927 1481 ntBASIC20.16■□□□□ 0.82
PCDHB1Q9Y5F3 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHB1Q9Y5F3 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
PCDHB1Q9Y5F3 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHB1Q9Y5F3 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
PCDHB1Q9Y5F3 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHB1Q9Y5F3 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHB1Q9Y5F3 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
PCDHB1Q9Y5F3 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.15■□□□□ 0.82
PCDHB1Q9Y5F3 UNC93B5-201ENST00000530315 699 ntBASIC20.15■□□□□ 0.82
PCDHB1Q9Y5F3 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.15■□□□□ 0.82
PCDHB1Q9Y5F3 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.15■□□□□ 0.82
PCDHB1Q9Y5F3 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
PCDHB1Q9Y5F3 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.15■□□□□ 0.82
PCDHB1Q9Y5F3 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
PCDHB1Q9Y5F3 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHB1Q9Y5F3 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
PCDHB1Q9Y5F3 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
PCDHB1Q9Y5F3 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHB1Q9Y5F3 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHB1Q9Y5F3 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.14■□□□□ 0.82
PCDHB1Q9Y5F3 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
PCDHB1Q9Y5F3 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHB1Q9Y5F3 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHB1Q9Y5F3 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHB1Q9Y5F3 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
PCDHB1Q9Y5F3 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.14■□□□□ 0.81
PCDHB1Q9Y5F3 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.14■□□□□ 0.81
PCDHB1Q9Y5F3 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHB1Q9Y5F3 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.14■□□□□ 0.81
PCDHB1Q9Y5F3 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.14■□□□□ 0.81
PCDHB1Q9Y5F3 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.13■□□□□ 0.81
PCDHB1Q9Y5F3 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.13■□□□□ 0.81
PCDHB1Q9Y5F3 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHB1Q9Y5F3 AC092667.1-201ENST00000434301 2586 ntBASIC20.13■□□□□ 0.81
PCDHB1Q9Y5F3 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHB1Q9Y5F3 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDHB1Q9Y5F3 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDHB1Q9Y5F3 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHB1Q9Y5F3 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHB1Q9Y5F3 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.13■□□□□ 0.81
PCDHB1Q9Y5F3 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.13■□□□□ 0.81
PCDHB1Q9Y5F3 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
PCDHB1Q9Y5F3 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHB1Q9Y5F3 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.13■□□□□ 0.81
PCDHB1Q9Y5F3 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDHB1Q9Y5F3 AP003097.1-201ENST00000530657 1135 ntBASIC20.13■□□□□ 0.81
PCDHB1Q9Y5F3 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDHB1Q9Y5F3 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDHB1Q9Y5F3 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.13■□□□□ 0.81
PCDHB1Q9Y5F3 AL356652.1-201ENST00000615962 565 ntBASIC20.13■□□□□ 0.81
PCDHB1Q9Y5F3 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
PCDHB1Q9Y5F3 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
PCDHB1Q9Y5F3 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHB1Q9Y5F3 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDHB1Q9Y5F3 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.13■□□□□ 0.81
PCDHB1Q9Y5F3 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHB1Q9Y5F3 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHB1Q9Y5F3 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHB1Q9Y5F3 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHB1Q9Y5F3 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHB1Q9Y5F3 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHB1Q9Y5F3 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.12■□□□□ 0.81
PCDHB1Q9Y5F3 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHB1Q9Y5F3 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHB1Q9Y5F3 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHB1Q9Y5F3 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHB1Q9Y5F3 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHB1Q9Y5F3 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHB1Q9Y5F3 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHB1Q9Y5F3 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHB1Q9Y5F3 MCRIP2P1-201ENST00000394346 511 ntBASIC20.12■□□□□ 0.81
PCDHB1Q9Y5F3 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.12■□□□□ 0.81
PCDHB1Q9Y5F3 LSM12P1-201ENST00000411836 588 ntBASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms