Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHMP2BQ9UQN3 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.49■□□□□ 0.87
CHMP2BQ9UQN3 SLC7A5P1-201ENST00000568957 537 ntBASIC20.49■□□□□ 0.87
CHMP2BQ9UQN3 KRT18P61-201ENST00000585825 1298 ntBASIC20.49■□□□□ 0.87
CHMP2BQ9UQN3 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.49■□□□□ 0.87
CHMP2BQ9UQN3 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHMP2BQ9UQN3 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CHMP2BQ9UQN3 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.49■□□□□ 0.87
CHMP2BQ9UQN3 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHMP2BQ9UQN3 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CHMP2BQ9UQN3 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHMP2BQ9UQN3 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHMP2BQ9UQN3 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CHMP2BQ9UQN3 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CHMP2BQ9UQN3 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHMP2BQ9UQN3 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.48■□□□□ 0.87
CHMP2BQ9UQN3 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHMP2BQ9UQN3 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
CHMP2BQ9UQN3 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.48■□□□□ 0.87
CHMP2BQ9UQN3 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.48■□□□□ 0.87
CHMP2BQ9UQN3 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.48■□□□□ 0.87
CHMP2BQ9UQN3 FAM21FP-204ENST00000608637 956 ntBASIC20.48■□□□□ 0.87
CHMP2BQ9UQN3 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.48■□□□□ 0.87
CHMP2BQ9UQN3 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.48■□□□□ 0.87
CHMP2BQ9UQN3 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHMP2BQ9UQN3 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CHMP2BQ9UQN3 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHMP2BQ9UQN3 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CHMP2BQ9UQN3 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHMP2BQ9UQN3 AL691432.2-201ENST00000607222 2038 ntBASIC20.48■□□□□ 0.87
CHMP2BQ9UQN3 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHMP2BQ9UQN3 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CHMP2BQ9UQN3 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.47■□□□□ 0.87
CHMP2BQ9UQN3 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.47■□□□□ 0.87
CHMP2BQ9UQN3 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.47■□□□□ 0.87
CHMP2BQ9UQN3 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHMP2BQ9UQN3 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHMP2BQ9UQN3 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CHMP2BQ9UQN3 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CHMP2BQ9UQN3 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.47■□□□□ 0.87
CHMP2BQ9UQN3 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.47■□□□□ 0.87
CHMP2BQ9UQN3 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CHMP2BQ9UQN3 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.47■□□□□ 0.87
CHMP2BQ9UQN3 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.47■□□□□ 0.87
CHMP2BQ9UQN3 UBE2DNL-204ENST00000602536 740 ntBASIC20.47■□□□□ 0.87
CHMP2BQ9UQN3 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHMP2BQ9UQN3 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.47■□□□□ 0.87
CHMP2BQ9UQN3 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CHMP2BQ9UQN3 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHMP2BQ9UQN3 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
CHMP2BQ9UQN3 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHMP2BQ9UQN3 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHMP2BQ9UQN3 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHMP2BQ9UQN3 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHMP2BQ9UQN3 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHMP2BQ9UQN3 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CHMP2BQ9UQN3 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CHMP2BQ9UQN3 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.46■□□□□ 0.87
CHMP2BQ9UQN3 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CHMP2BQ9UQN3 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHMP2BQ9UQN3 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CHMP2BQ9UQN3 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
CHMP2BQ9UQN3 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHMP2BQ9UQN3 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHMP2BQ9UQN3 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.46■□□□□ 0.87
CHMP2BQ9UQN3 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHMP2BQ9UQN3 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.46■□□□□ 0.87
CHMP2BQ9UQN3 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CHMP2BQ9UQN3 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHMP2BQ9UQN3 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHMP2BQ9UQN3 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHMP2BQ9UQN3 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.46■□□□□ 0.87
CHMP2BQ9UQN3 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.46■□□□□ 0.87
CHMP2BQ9UQN3 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHMP2BQ9UQN3 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CHMP2BQ9UQN3 AC116562.4-201ENST00000641316 2276 ntBASIC20.46■□□□□ 0.87
CHMP2BQ9UQN3 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CHMP2BQ9UQN3 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CHMP2BQ9UQN3 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHMP2BQ9UQN3 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHMP2BQ9UQN3 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHMP2BQ9UQN3 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHMP2BQ9UQN3 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHMP2BQ9UQN3 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CHMP2BQ9UQN3 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
CHMP2BQ9UQN3 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
CHMP2BQ9UQN3 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHMP2BQ9UQN3 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CHMP2BQ9UQN3 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.45■□□□□ 0.86
CHMP2BQ9UQN3 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.45■□□□□ 0.86
CHMP2BQ9UQN3 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.45■□□□□ 0.86
CHMP2BQ9UQN3 CDV3P1-201ENST00000471403 739 ntBASIC20.45■□□□□ 0.86
CHMP2BQ9UQN3 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.45■□□□□ 0.86
CHMP2BQ9UQN3 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CHMP2BQ9UQN3 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CHMP2BQ9UQN3 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CHMP2BQ9UQN3 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CHMP2BQ9UQN3 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHMP2BQ9UQN3 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHMP2BQ9UQN3 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms