Protein–RNA interactions for Protein: Q9UMS5

PHTF1, Putative homeodomain transcription factor 1, humanhuman

Predictions only

Length 762 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1Q9UMS5 AC020907.5-201ENST00000624372 1936 ntBASIC20.75■□□□□ 0.91
PHTF1Q9UMS5 AL512625.2-201ENST00000417533 625 ntBASIC20.75■□□□□ 0.91
PHTF1Q9UMS5 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PHTF1Q9UMS5 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
PHTF1Q9UMS5 AC083906.2-201ENST00000511578 360 ntBASIC20.75■□□□□ 0.91
PHTF1Q9UMS5 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PHTF1Q9UMS5 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
PHTF1Q9UMS5 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.75■□□□□ 0.91
PHTF1Q9UMS5 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
PHTF1Q9UMS5 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PHTF1Q9UMS5 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.75■□□□□ 0.91
PHTF1Q9UMS5 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PHTF1Q9UMS5 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
PHTF1Q9UMS5 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PHTF1Q9UMS5 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
PHTF1Q9UMS5 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.74■□□□□ 0.91
PHTF1Q9UMS5 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PHTF1Q9UMS5 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PHTF1Q9UMS5 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
PHTF1Q9UMS5 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
PHTF1Q9UMS5 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PHTF1Q9UMS5 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PHTF1Q9UMS5 GPX1P1-201ENST00000388829 606 ntBASIC20.74■□□□□ 0.91
PHTF1Q9UMS5 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PHTF1Q9UMS5 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.74■□□□□ 0.91
PHTF1Q9UMS5 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.74■□□□□ 0.91
PHTF1Q9UMS5 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PHTF1Q9UMS5 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.74■□□□□ 0.91
PHTF1Q9UMS5 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
PHTF1Q9UMS5 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.74■□□□□ 0.91
PHTF1Q9UMS5 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.74■□□□□ 0.91
PHTF1Q9UMS5 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
PHTF1Q9UMS5 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
PHTF1Q9UMS5 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.74■□□□□ 0.91
PHTF1Q9UMS5 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.74■□□□□ 0.91
PHTF1Q9UMS5 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
PHTF1Q9UMS5 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PHTF1Q9UMS5 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PHTF1Q9UMS5 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.73■□□□□ 0.91
PHTF1Q9UMS5 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
PHTF1Q9UMS5 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.73■□□□□ 0.91
PHTF1Q9UMS5 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.73■□□□□ 0.91
PHTF1Q9UMS5 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PHTF1Q9UMS5 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.73■□□□□ 0.91
PHTF1Q9UMS5 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
PHTF1Q9UMS5 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
PHTF1Q9UMS5 AC112907.3-201ENST00000577781 2400 ntBASIC20.73■□□□□ 0.91
PHTF1Q9UMS5 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PHTF1Q9UMS5 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PHTF1Q9UMS5 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.73■□□□□ 0.91
PHTF1Q9UMS5 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.73■□□□□ 0.91
PHTF1Q9UMS5 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PHTF1Q9UMS5 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.73■□□□□ 0.91
PHTF1Q9UMS5 AC105036.2-201ENST00000569468 176 ntBASIC20.73■□□□□ 0.91
PHTF1Q9UMS5 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.73■□□□□ 0.91
PHTF1Q9UMS5 AC087289.5-201ENST00000586076 3175 ntBASIC20.73■□□□□ 0.91
PHTF1Q9UMS5 AC011484.1-201ENST00000377652 1995 ntBASIC20.73■□□□□ 0.91
PHTF1Q9UMS5 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PHTF1Q9UMS5 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
PHTF1Q9UMS5 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PHTF1Q9UMS5 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.73■□□□□ 0.91
PHTF1Q9UMS5 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.73■□□□□ 0.91
PHTF1Q9UMS5 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PHTF1Q9UMS5 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.73■□□□□ 0.91
PHTF1Q9UMS5 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PHTF1Q9UMS5 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PHTF1Q9UMS5 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.73■□□□□ 0.91
PHTF1Q9UMS5 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PHTF1Q9UMS5 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PHTF1Q9UMS5 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PHTF1Q9UMS5 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PHTF1Q9UMS5 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
PHTF1Q9UMS5 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PHTF1Q9UMS5 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PHTF1Q9UMS5 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PHTF1Q9UMS5 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.72■□□□□ 0.91
PHTF1Q9UMS5 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PHTF1Q9UMS5 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PHTF1Q9UMS5 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PHTF1Q9UMS5 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.71■□□□□ 0.91
PHTF1Q9UMS5 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PHTF1Q9UMS5 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PHTF1Q9UMS5 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
PHTF1Q9UMS5 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PHTF1Q9UMS5 ID1-201ENST00000376105 1233 ntBASIC20.71■□□□□ 0.91
PHTF1Q9UMS5 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.71■□□□□ 0.91
PHTF1Q9UMS5 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.71■□□□□ 0.91
PHTF1Q9UMS5 AC100791.3-201ENST00000617619 330 ntBASIC20.71■□□□□ 0.91
PHTF1Q9UMS5 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PHTF1Q9UMS5 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.71■□□□□ 0.91
PHTF1Q9UMS5 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PHTF1Q9UMS5 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.71■□□□□ 0.91
PHTF1Q9UMS5 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
PHTF1Q9UMS5 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PHTF1Q9UMS5 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PHTF1Q9UMS5 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.7■□□□□ 0.91
PHTF1Q9UMS5 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
PHTF1Q9UMS5 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PHTF1Q9UMS5 AC121338.2-201ENST00000622535 1744 ntBASIC20.7■□□□□ 0.9
PHTF1Q9UMS5 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms