Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21.63■■□□□ 1.05
SIX4Q9UIU6 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SIX4Q9UIU6 SOX15-203ENST00000570788 1093 ntBASIC21.63■■□□□ 1.05
SIX4Q9UIU6 AC006557.6-201ENST00000623071 864 ntBASIC21.63■■□□□ 1.05
SIX4Q9UIU6 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SIX4Q9UIU6 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SIX4Q9UIU6 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SIX4Q9UIU6 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SIX4Q9UIU6 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.62■■□□□ 1.05
SIX4Q9UIU6 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.62■■□□□ 1.05
SIX4Q9UIU6 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
SIX4Q9UIU6 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.62■■□□□ 1.05
SIX4Q9UIU6 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
SIX4Q9UIU6 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.62■■□□□ 1.05
SIX4Q9UIU6 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SIX4Q9UIU6 POU5F1P3-201ENST00000428824 1078 ntBASIC21.62■■□□□ 1.05
SIX4Q9UIU6 AC026366.1-201ENST00000488803 879 ntBASIC21.62■■□□□ 1.05
SIX4Q9UIU6 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.62■■□□□ 1.05
SIX4Q9UIU6 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.62■■□□□ 1.05
SIX4Q9UIU6 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
SIX4Q9UIU6 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SIX4Q9UIU6 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SIX4Q9UIU6 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SIX4Q9UIU6 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SIX4Q9UIU6 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SIX4Q9UIU6 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.61■■□□□ 1.05
SIX4Q9UIU6 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SIX4Q9UIU6 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
SIX4Q9UIU6 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.61■■□□□ 1.05
SIX4Q9UIU6 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.61■■□□□ 1.05
SIX4Q9UIU6 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SIX4Q9UIU6 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SIX4Q9UIU6 GABARAPL3-202ENST00000624044 1851 ntBASIC21.61■■□□□ 1.05
SIX4Q9UIU6 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
SIX4Q9UIU6 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
SIX4Q9UIU6 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.61■■□□□ 1.05
SIX4Q9UIU6 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SIX4Q9UIU6 ADM-205ENST00000528544 586 ntTSL 2 BASIC21.61■■□□□ 1.05
SIX4Q9UIU6 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC21.61■■□□□ 1.05
SIX4Q9UIU6 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SIX4Q9UIU6 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
SIX4Q9UIU6 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SIX4Q9UIU6 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.61■■□□□ 1.05
SIX4Q9UIU6 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SIX4Q9UIU6 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SIX4Q9UIU6 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.61■■□□□ 1.05
SIX4Q9UIU6 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.61■■□□□ 1.05
SIX4Q9UIU6 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.61■■□□□ 1.05
SIX4Q9UIU6 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.6■■□□□ 1.05
SIX4Q9UIU6 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SIX4Q9UIU6 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SIX4Q9UIU6 AL512408.1-201ENST00000569378 2000 ntBASIC21.6■■□□□ 1.05
SIX4Q9UIU6 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SIX4Q9UIU6 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
SIX4Q9UIU6 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SIX4Q9UIU6 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SIX4Q9UIU6 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SIX4Q9UIU6 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SIX4Q9UIU6 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
SIX4Q9UIU6 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SIX4Q9UIU6 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SIX4Q9UIU6 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SIX4Q9UIU6 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC21.6■■□□□ 1.05
SIX4Q9UIU6 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
SIX4Q9UIU6 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC21.6■■□□□ 1.05
SIX4Q9UIU6 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21.6■■□□□ 1.05
SIX4Q9UIU6 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC21.6■■□□□ 1.05
SIX4Q9UIU6 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
SIX4Q9UIU6 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SIX4Q9UIU6 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SIX4Q9UIU6 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SIX4Q9UIU6 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SIX4Q9UIU6 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
SIX4Q9UIU6 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.6■■□□□ 1.05
SIX4Q9UIU6 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.6■■□□□ 1.05
SIX4Q9UIU6 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SIX4Q9UIU6 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.59■■□□□ 1.05
SIX4Q9UIU6 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SIX4Q9UIU6 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
SIX4Q9UIU6 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SIX4Q9UIU6 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SIX4Q9UIU6 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
SIX4Q9UIU6 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SIX4Q9UIU6 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
SIX4Q9UIU6 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SIX4Q9UIU6 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC21.59■■□□□ 1.05
SIX4Q9UIU6 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SIX4Q9UIU6 AL031963.3-201ENST00000606441 850 ntBASIC21.59■■□□□ 1.05
SIX4Q9UIU6 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SIX4Q9UIU6 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SIX4Q9UIU6 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SIX4Q9UIU6 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SIX4Q9UIU6 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.59■■□□□ 1.05
SIX4Q9UIU6 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.58■■□□□ 1.05
SIX4Q9UIU6 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
SIX4Q9UIU6 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.58■■□□□ 1.05
SIX4Q9UIU6 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
SIX4Q9UIU6 LINC01006-201ENST00000333319 2292 ntBASIC21.58■■□□□ 1.05
SIX4Q9UIU6 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SIX4Q9UIU6 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms