Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 FP700111.2-201ENST00000619190 1892 ntBASIC20.97■□□□□ 0.95
PPARGC1AQ9UBK2 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PPARGC1AQ9UBK2 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PPARGC1AQ9UBK2 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PPARGC1AQ9UBK2 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PPARGC1AQ9UBK2 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PPARGC1AQ9UBK2 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.97■□□□□ 0.95
PPARGC1AQ9UBK2 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.97■□□□□ 0.95
PPARGC1AQ9UBK2 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.97■□□□□ 0.95
PPARGC1AQ9UBK2 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PPARGC1AQ9UBK2 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.97■□□□□ 0.95
PPARGC1AQ9UBK2 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PPARGC1AQ9UBK2 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PPARGC1AQ9UBK2 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
PPARGC1AQ9UBK2 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
PPARGC1AQ9UBK2 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PPARGC1AQ9UBK2 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.96■□□□□ 0.95
PPARGC1AQ9UBK2 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PPARGC1AQ9UBK2 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.96■□□□□ 0.95
PPARGC1AQ9UBK2 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PPARGC1AQ9UBK2 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PPARGC1AQ9UBK2 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PPARGC1AQ9UBK2 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PPARGC1AQ9UBK2 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PPARGC1AQ9UBK2 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.96■□□□□ 0.95
PPARGC1AQ9UBK2 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
PPARGC1AQ9UBK2 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.96■□□□□ 0.95
PPARGC1AQ9UBK2 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
PPARGC1AQ9UBK2 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
PPARGC1AQ9UBK2 AC133041.1-202ENST00000642053 222 ntBASIC20.96■□□□□ 0.95
PPARGC1AQ9UBK2 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PPARGC1AQ9UBK2 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PPARGC1AQ9UBK2 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.96■□□□□ 0.95
PPARGC1AQ9UBK2 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PPARGC1AQ9UBK2 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PPARGC1AQ9UBK2 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
PPARGC1AQ9UBK2 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PPARGC1AQ9UBK2 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
PPARGC1AQ9UBK2 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
PPARGC1AQ9UBK2 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PPARGC1AQ9UBK2 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PPARGC1AQ9UBK2 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PPARGC1AQ9UBK2 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PPARGC1AQ9UBK2 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PPARGC1AQ9UBK2 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.95■□□□□ 0.94
PPARGC1AQ9UBK2 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PPARGC1AQ9UBK2 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
PPARGC1AQ9UBK2 AL355802.2-201ENST00000402069 882 ntBASIC20.95■□□□□ 0.94
PPARGC1AQ9UBK2 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PPARGC1AQ9UBK2 AC069152.1-201ENST00000438030 544 ntBASIC20.95■□□□□ 0.94
PPARGC1AQ9UBK2 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.95■□□□□ 0.94
PPARGC1AQ9UBK2 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.95■□□□□ 0.94
PPARGC1AQ9UBK2 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PPARGC1AQ9UBK2 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.95■□□□□ 0.94
PPARGC1AQ9UBK2 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PPARGC1AQ9UBK2 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.95■□□□□ 0.94
PPARGC1AQ9UBK2 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
PPARGC1AQ9UBK2 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PPARGC1AQ9UBK2 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PPARGC1AQ9UBK2 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.95■□□□□ 0.94
PPARGC1AQ9UBK2 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
PPARGC1AQ9UBK2 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.95■□□□□ 0.94
PPARGC1AQ9UBK2 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.95■□□□□ 0.94
PPARGC1AQ9UBK2 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.94■□□□□ 0.94
PPARGC1AQ9UBK2 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
PPARGC1AQ9UBK2 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PPARGC1AQ9UBK2 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.94■□□□□ 0.94
PPARGC1AQ9UBK2 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.94■□□□□ 0.94
PPARGC1AQ9UBK2 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.94■□□□□ 0.94
PPARGC1AQ9UBK2 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PPARGC1AQ9UBK2 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PPARGC1AQ9UBK2 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.94■□□□□ 0.94
PPARGC1AQ9UBK2 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
PPARGC1AQ9UBK2 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PPARGC1AQ9UBK2 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.94■□□□□ 0.94
PPARGC1AQ9UBK2 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
PPARGC1AQ9UBK2 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PPARGC1AQ9UBK2 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PPARGC1AQ9UBK2 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PPARGC1AQ9UBK2 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.93■□□□□ 0.94
PPARGC1AQ9UBK2 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PPARGC1AQ9UBK2 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PPARGC1AQ9UBK2 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.93■□□□□ 0.94
PPARGC1AQ9UBK2 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PPARGC1AQ9UBK2 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
PPARGC1AQ9UBK2 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
PPARGC1AQ9UBK2 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.93■□□□□ 0.94
PPARGC1AQ9UBK2 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.93■□□□□ 0.94
PPARGC1AQ9UBK2 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.93■□□□□ 0.94
PPARGC1AQ9UBK2 AC091874.3-201ENST00000512672 1195 ntBASIC20.93■□□□□ 0.94
PPARGC1AQ9UBK2 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.93■□□□□ 0.94
PPARGC1AQ9UBK2 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PPARGC1AQ9UBK2 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.93■□□□□ 0.94
PPARGC1AQ9UBK2 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
PPARGC1AQ9UBK2 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.93■□□□□ 0.94
PPARGC1AQ9UBK2 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PPARGC1AQ9UBK2 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
PPARGC1AQ9UBK2 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.93■□□□□ 0.94
PPARGC1AQ9UBK2 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PPARGC1AQ9UBK2 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms