Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
LINC00474Q9P2X8 MCRIP2P1-201ENST00000394346 511 ntBASIC13.1□□□□□ -0.31
LINC00474Q9P2X8 CNN2P6-201ENST00000439038 900 ntBASIC13.1□□□□□ -0.31
LINC00474Q9P2X8 HES2-205ENST00000487437 968 ntTSL 3 BASIC13.1□□□□□ -0.31
LINC00474Q9P2X8 AC133552.2-202ENST00000575694 574 ntBASIC13.1□□□□□ -0.31
LINC00474Q9P2X8 IKBKGP1-201ENST00000612193 1073 ntBASIC13.1□□□□□ -0.31
LINC00474Q9P2X8 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00474Q9P2X8 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00474Q9P2X8 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC13.1□□□□□ -0.31
LINC00474Q9P2X8 AC092437.1-201ENST00000624794 1048 ntBASIC13.1□□□□□ -0.31
LINC00474Q9P2X8 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00474Q9P2X8 AC068338.2-201ENST00000563278 1430 ntBASIC13.1□□□□□ -0.31
LINC00474Q9P2X8 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00474Q9P2X8 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00474Q9P2X8 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00474Q9P2X8 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC13.1□□□□□ -0.31
LINC00474Q9P2X8 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00474Q9P2X8 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
LINC00474Q9P2X8 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
LINC00474Q9P2X8 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00474Q9P2X8 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC13.09□□□□□ -0.31
LINC00474Q9P2X8 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC13.09□□□□□ -0.31
LINC00474Q9P2X8 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00474Q9P2X8 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
LINC00474Q9P2X8 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00474Q9P2X8 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC13.09□□□□□ -0.31
LINC00474Q9P2X8 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00474Q9P2X8 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
LINC00474Q9P2X8 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00474Q9P2X8 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00474Q9P2X8 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC13.09□□□□□ -0.31
LINC00474Q9P2X8 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00474Q9P2X8 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC13.09□□□□□ -0.31
LINC00474Q9P2X8 CYP2T1P-201ENST00000432607 1285 ntBASIC13.09□□□□□ -0.31
LINC00474Q9P2X8 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00474Q9P2X8 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC13.09□□□□□ -0.31
LINC00474Q9P2X8 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC13.09□□□□□ -0.31
LINC00474Q9P2X8 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
LINC00474Q9P2X8 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC13.09□□□□□ -0.31
LINC00474Q9P2X8 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
LINC00474Q9P2X8 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00474Q9P2X8 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC13.09□□□□□ -0.31
LINC00474Q9P2X8 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
LINC00474Q9P2X8 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC13.09□□□□□ -0.31
LINC00474Q9P2X8 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC13.09□□□□□ -0.31
LINC00474Q9P2X8 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00474Q9P2X8 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00474Q9P2X8 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC13.08□□□□□ -0.31
LINC00474Q9P2X8 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
LINC00474Q9P2X8 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
LINC00474Q9P2X8 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
LINC00474Q9P2X8 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
LINC00474Q9P2X8 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC13.08□□□□□ -0.32
LINC00474Q9P2X8 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
LINC00474Q9P2X8 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC13.08□□□□□ -0.32
LINC00474Q9P2X8 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00474Q9P2X8 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC13.08□□□□□ -0.32
LINC00474Q9P2X8 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00474Q9P2X8 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
LINC00474Q9P2X8 AC027702.1-201ENST00000563810 1770 ntBASIC13.08□□□□□ -0.32
LINC00474Q9P2X8 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC13.08□□□□□ -0.32
LINC00474Q9P2X8 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
LINC00474Q9P2X8 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00474Q9P2X8 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
LINC00474Q9P2X8 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC13.08□□□□□ -0.32
LINC00474Q9P2X8 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC13.08□□□□□ -0.32
LINC00474Q9P2X8 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00474Q9P2X8 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00474Q9P2X8 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00474Q9P2X8 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC13.08□□□□□ -0.32
LINC00474Q9P2X8 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00474Q9P2X8 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00474Q9P2X8 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC13.08□□□□□ -0.32
LINC00474Q9P2X8 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC13.08□□□□□ -0.32
LINC00474Q9P2X8 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00474Q9P2X8 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00474Q9P2X8 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00474Q9P2X8 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
LINC00474Q9P2X8 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00474Q9P2X8 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
LINC00474Q9P2X8 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00474Q9P2X8 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC13.07□□□□□ -0.32
LINC00474Q9P2X8 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00474Q9P2X8 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
LINC00474Q9P2X8 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00474Q9P2X8 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00474Q9P2X8 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00474Q9P2X8 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00474Q9P2X8 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00474Q9P2X8 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC13.07□□□□□ -0.32
LINC00474Q9P2X8 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC13.07□□□□□ -0.32
LINC00474Q9P2X8 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00474Q9P2X8 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00474Q9P2X8 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
LINC00474Q9P2X8 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC13.07□□□□□ -0.32
LINC00474Q9P2X8 APTR-203ENST00000430801 583 ntTSL 5 BASIC13.07□□□□□ -0.32
LINC00474Q9P2X8 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00474Q9P2X8 CDCA4P2-201ENST00000441182 718 ntBASIC13.07□□□□□ -0.32
LINC00474Q9P2X8 AF201337.1-201ENST00000520239 748 ntBASIC13.07□□□□□ -0.32
LINC00474Q9P2X8 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms