Protein–RNA interactions for Protein: Q9NWD8

TMEM248, Transmembrane protein 248, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248Q9NWD8 AL031963.3-201ENST00000606441 850 ntBASIC20.64■□□□□ 0.89
TMEM248Q9NWD8 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.64■□□□□ 0.89
TMEM248Q9NWD8 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TMEM248Q9NWD8 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TMEM248Q9NWD8 AL162377.1-201ENST00000618844 1793 ntBASIC20.64■□□□□ 0.89
TMEM248Q9NWD8 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.64■□□□□ 0.89
TMEM248Q9NWD8 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.63■□□□□ 0.89
TMEM248Q9NWD8 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.63■□□□□ 0.89
TMEM248Q9NWD8 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.63■□□□□ 0.89
TMEM248Q9NWD8 AL512408.1-201ENST00000569378 2000 ntBASIC20.63■□□□□ 0.89
TMEM248Q9NWD8 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM248Q9NWD8 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM248Q9NWD8 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM248Q9NWD8 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM248Q9NWD8 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.63■□□□□ 0.89
TMEM248Q9NWD8 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM248Q9NWD8 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.63■□□□□ 0.89
TMEM248Q9NWD8 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
TMEM248Q9NWD8 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM248Q9NWD8 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM248Q9NWD8 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM248Q9NWD8 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.63■□□□□ 0.89
TMEM248Q9NWD8 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.63■□□□□ 0.89
TMEM248Q9NWD8 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.63■□□□□ 0.89
TMEM248Q9NWD8 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM248Q9NWD8 RNA5SP413-201ENST00000516373 109 ntBASIC20.63■□□□□ 0.89
TMEM248Q9NWD8 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM248Q9NWD8 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM248Q9NWD8 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM248Q9NWD8 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.63■□□□□ 0.89
TMEM248Q9NWD8 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM248Q9NWD8 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
TMEM248Q9NWD8 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
TMEM248Q9NWD8 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM248Q9NWD8 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.62■□□□□ 0.89
TMEM248Q9NWD8 KRT8P20-201ENST00000423953 1409 ntBASIC20.62■□□□□ 0.89
TMEM248Q9NWD8 KRT8P17-201ENST00000453110 1448 ntBASIC20.62■□□□□ 0.89
TMEM248Q9NWD8 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM248Q9NWD8 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.62■□□□□ 0.89
TMEM248Q9NWD8 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.62■□□□□ 0.89
TMEM248Q9NWD8 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM248Q9NWD8 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM248Q9NWD8 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM248Q9NWD8 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
TMEM248Q9NWD8 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.62■□□□□ 0.89
TMEM248Q9NWD8 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.62■□□□□ 0.89
TMEM248Q9NWD8 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.62■□□□□ 0.89
TMEM248Q9NWD8 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.62■□□□□ 0.89
TMEM248Q9NWD8 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.62■□□□□ 0.89
TMEM248Q9NWD8 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.62■□□□□ 0.89
TMEM248Q9NWD8 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.62■□□□□ 0.89
TMEM248Q9NWD8 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
TMEM248Q9NWD8 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.62■□□□□ 0.89
TMEM248Q9NWD8 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.62■□□□□ 0.89
TMEM248Q9NWD8 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.62■□□□□ 0.89
TMEM248Q9NWD8 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM248Q9NWD8 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM248Q9NWD8 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM248Q9NWD8 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM248Q9NWD8 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.62■□□□□ 0.89
TMEM248Q9NWD8 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM248Q9NWD8 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
TMEM248Q9NWD8 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM248Q9NWD8 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM248Q9NWD8 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM248Q9NWD8 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.61■□□□□ 0.89
TMEM248Q9NWD8 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM248Q9NWD8 CD99P1-205ENST00000527459 561 ntBASIC20.61■□□□□ 0.89
TMEM248Q9NWD8 UNC93B5-201ENST00000530315 699 ntBASIC20.61■□□□□ 0.89
TMEM248Q9NWD8 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.61■□□□□ 0.89
TMEM248Q9NWD8 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.61■□□□□ 0.89
TMEM248Q9NWD8 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
TMEM248Q9NWD8 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.61■□□□□ 0.89
TMEM248Q9NWD8 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM248Q9NWD8 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.61■□□□□ 0.89
TMEM248Q9NWD8 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM248Q9NWD8 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM248Q9NWD8 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.61■□□□□ 0.89
TMEM248Q9NWD8 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM248Q9NWD8 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.61■□□□□ 0.89
TMEM248Q9NWD8 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.6■□□□□ 0.89
TMEM248Q9NWD8 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM248Q9NWD8 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM248Q9NWD8 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM248Q9NWD8 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM248Q9NWD8 HLA-G-202ENST00000376815 851 ntBASIC20.6■□□□□ 0.89
TMEM248Q9NWD8 HLA-G-203ENST00000376818 1127 ntBASIC20.6■□□□□ 0.89
TMEM248Q9NWD8 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM248Q9NWD8 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
TMEM248Q9NWD8 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.6■□□□□ 0.89
TMEM248Q9NWD8 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.6■□□□□ 0.89
TMEM248Q9NWD8 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.6■□□□□ 0.89
TMEM248Q9NWD8 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.6■□□□□ 0.89
TMEM248Q9NWD8 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.6■□□□□ 0.89
TMEM248Q9NWD8 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.6■□□□□ 0.89
TMEM248Q9NWD8 LINC01521-201ENST00000504184 1943 ntBASIC20.6■□□□□ 0.89
TMEM248Q9NWD8 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM248Q9NWD8 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM248Q9NWD8 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM248Q9NWD8 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms