Protein–RNA interactions for Protein: Q9H254

SPTBN4, Spectrin beta chain, non-erythrocytic 4, humanhuman

Predictions only

Length 2,564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4Q9H254 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SPTBN4Q9H254 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SPTBN4Q9H254 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPTBN4Q9H254 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SPTBN4Q9H254 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPTBN4Q9H254 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.44■□□□□ 0.7
SPTBN4Q9H254 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.44■□□□□ 0.7
SPTBN4Q9H254 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.44■□□□□ 0.7
SPTBN4Q9H254 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.44■□□□□ 0.7
SPTBN4Q9H254 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.44■□□□□ 0.7
SPTBN4Q9H254 AC137767.1-201ENST00000602918 1920 ntBASIC19.44■□□□□ 0.7
SPTBN4Q9H254 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPTBN4Q9H254 AC138932.3-201ENST00000567634 1902 ntBASIC19.44■□□□□ 0.7
SPTBN4Q9H254 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPTBN4Q9H254 FSCN1P1-201ENST00000568912 1481 ntBASIC19.44■□□□□ 0.7
SPTBN4Q9H254 AC004870.1-201ENST00000315132 882 ntBASIC19.44■□□□□ 0.7
SPTBN4Q9H254 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.44■□□□□ 0.7
SPTBN4Q9H254 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPTBN4Q9H254 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.44■□□□□ 0.7
SPTBN4Q9H254 HOMER2P1-201ENST00000455653 964 ntBASIC19.44■□□□□ 0.7
SPTBN4Q9H254 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.44■□□□□ 0.7
SPTBN4Q9H254 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SPTBN4Q9H254 AL445675.2-201ENST00000620291 557 ntBASIC19.44■□□□□ 0.7
SPTBN4Q9H254 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPTBN4Q9H254 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.44■□□□□ 0.7
SPTBN4Q9H254 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPTBN4Q9H254 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.44■□□□□ 0.7
SPTBN4Q9H254 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SPTBN4Q9H254 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.43■□□□□ 0.7
SPTBN4Q9H254 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPTBN4Q9H254 FAM220CP-201ENST00000395253 831 ntBASIC19.43■□□□□ 0.7
SPTBN4Q9H254 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC19.43■□□□□ 0.7
SPTBN4Q9H254 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SPTBN4Q9H254 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
SPTBN4Q9H254 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
SPTBN4Q9H254 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPTBN4Q9H254 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPTBN4Q9H254 ATP5G2P1-201ENST00000433580 426 ntBASIC19.43■□□□□ 0.7
SPTBN4Q9H254 AC007663.1-201ENST00000438948 1240 ntBASIC19.43■□□□□ 0.7
SPTBN4Q9H254 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPTBN4Q9H254 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPTBN4Q9H254 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SPTBN4Q9H254 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPTBN4Q9H254 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SPTBN4Q9H254 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPTBN4Q9H254 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.42■□□□□ 0.7
SPTBN4Q9H254 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPTBN4Q9H254 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.42■□□□□ 0.7
SPTBN4Q9H254 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.42■□□□□ 0.7
SPTBN4Q9H254 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.42■□□□□ 0.7
SPTBN4Q9H254 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.42■□□□□ 0.7
SPTBN4Q9H254 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.42■□□□□ 0.7
SPTBN4Q9H254 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.42■□□□□ 0.7
SPTBN4Q9H254 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPTBN4Q9H254 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
SPTBN4Q9H254 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPTBN4Q9H254 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.42■□□□□ 0.7
SPTBN4Q9H254 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.42■□□□□ 0.7
SPTBN4Q9H254 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPTBN4Q9H254 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.42■□□□□ 0.7
SPTBN4Q9H254 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SPTBN4Q9H254 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPTBN4Q9H254 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SPTBN4Q9H254 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SPTBN4Q9H254 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPTBN4Q9H254 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.42■□□□□ 0.7
SPTBN4Q9H254 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.42■□□□□ 0.7
SPTBN4Q9H254 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SPTBN4Q9H254 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SPTBN4Q9H254 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SPTBN4Q9H254 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SPTBN4Q9H254 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.41■□□□□ 0.7
SPTBN4Q9H254 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SPTBN4Q9H254 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.41■□□□□ 0.7
SPTBN4Q9H254 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SPTBN4Q9H254 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SPTBN4Q9H254 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SPTBN4Q9H254 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SPTBN4Q9H254 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SPTBN4Q9H254 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SPTBN4Q9H254 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SPTBN4Q9H254 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SPTBN4Q9H254 HYMAI.1-201ENST00000620949 238 ntBASIC19.4■□□□□ 0.7
SPTBN4Q9H254 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SPTBN4Q9H254 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SPTBN4Q9H254 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC19.4■□□□□ 0.7
SPTBN4Q9H254 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SPTBN4Q9H254 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SPTBN4Q9H254 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SPTBN4Q9H254 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.4■□□□□ 0.7
SPTBN4Q9H254 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.4■□□□□ 0.7
SPTBN4Q9H254 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.4■□□□□ 0.7
SPTBN4Q9H254 AL139424.1-201ENST00000607572 797 ntBASIC19.4■□□□□ 0.7
SPTBN4Q9H254 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SPTBN4Q9H254 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
SPTBN4Q9H254 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SPTBN4Q9H254 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SPTBN4Q9H254 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SPTBN4Q9H254 AL160237.2-201ENST00000556165 472 ntBASIC19.39■□□□□ 0.7
SPTBN4Q9H254 AL136038.3-201ENST00000561909 1096 ntBASIC19.39■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms