Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
LIMD2Q9BT23 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
LIMD2Q9BT23 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
LIMD2Q9BT23 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
LIMD2Q9BT23 AC005229.4-201ENST00000610085 2198 ntBASIC11.96□□□□□ -0.49
LIMD2Q9BT23 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
LIMD2Q9BT23 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
LIMD2Q9BT23 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
LIMD2Q9BT23 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
LIMD2Q9BT23 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
LIMD2Q9BT23 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
LIMD2Q9BT23 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
LIMD2Q9BT23 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
LIMD2Q9BT23 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC11.96□□□□□ -0.49
LIMD2Q9BT23 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
LIMD2Q9BT23 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
LIMD2Q9BT23 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
LIMD2Q9BT23 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
LIMD2Q9BT23 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC11.96□□□□□ -0.49
LIMD2Q9BT23 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
LIMD2Q9BT23 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
LIMD2Q9BT23 GUK1-205ENST00000366722 850 ntTSL 3 BASIC11.96□□□□□ -0.49
LIMD2Q9BT23 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
LIMD2Q9BT23 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
LIMD2Q9BT23 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC11.96□□□□□ -0.49
LIMD2Q9BT23 KRT18P14-201ENST00000534205 1250 ntBASIC11.96□□□□□ -0.49
LIMD2Q9BT23 SP2-202ENST00000613139 908 ntTSL 5 BASIC11.96□□□□□ -0.49
LIMD2Q9BT23 AC121338.2-201ENST00000622535 1744 ntBASIC11.96□□□□□ -0.49
LIMD2Q9BT23 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
LIMD2Q9BT23 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
LIMD2Q9BT23 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
LIMD2Q9BT23 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
LIMD2Q9BT23 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
LIMD2Q9BT23 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
LIMD2Q9BT23 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
LIMD2Q9BT23 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.5
LIMD2Q9BT23 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC11.96□□□□□ -0.5
LIMD2Q9BT23 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.5
LIMD2Q9BT23 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.5
LIMD2Q9BT23 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
LIMD2Q9BT23 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LIMD2Q9BT23 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
LIMD2Q9BT23 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
LIMD2Q9BT23 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LIMD2Q9BT23 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC11.95□□□□□ -0.5
LIMD2Q9BT23 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
LIMD2Q9BT23 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC11.95□□□□□ -0.5
LIMD2Q9BT23 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
LIMD2Q9BT23 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
LIMD2Q9BT23 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LIMD2Q9BT23 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
LIMD2Q9BT23 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
LIMD2Q9BT23 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LIMD2Q9BT23 AC087289.5-201ENST00000586076 3175 ntBASIC11.95□□□□□ -0.5
LIMD2Q9BT23 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
LIMD2Q9BT23 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
LIMD2Q9BT23 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
LIMD2Q9BT23 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LIMD2Q9BT23 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
LIMD2Q9BT23 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
LIMD2Q9BT23 JTB-203ENST00000368589 1216 ntTSL 2 BASIC11.95□□□□□ -0.5
LIMD2Q9BT23 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
LIMD2Q9BT23 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC11.95□□□□□ -0.5
LIMD2Q9BT23 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC11.95□□□□□ -0.5
LIMD2Q9BT23 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
LIMD2Q9BT23 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LIMD2Q9BT23 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC11.95□□□□□ -0.5
LIMD2Q9BT23 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC11.95□□□□□ -0.5
LIMD2Q9BT23 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC11.95□□□□□ -0.5
LIMD2Q9BT23 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC11.95□□□□□ -0.5
LIMD2Q9BT23 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC11.95□□□□□ -0.5
LIMD2Q9BT23 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
LIMD2Q9BT23 RAB43-208ENST00000615093 783 ntTSL 5 BASIC11.95□□□□□ -0.5
LIMD2Q9BT23 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
LIMD2Q9BT23 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
LIMD2Q9BT23 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
LIMD2Q9BT23 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC11.95□□□□□ -0.5
LIMD2Q9BT23 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
LIMD2Q9BT23 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LIMD2Q9BT23 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LIMD2Q9BT23 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
LIMD2Q9BT23 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
LIMD2Q9BT23 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC11.94□□□□□ -0.5
LIMD2Q9BT23 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LIMD2Q9BT23 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LIMD2Q9BT23 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC11.94□□□□□ -0.5
LIMD2Q9BT23 AC006128.1-201ENST00000624704 1661 ntBASIC11.94□□□□□ -0.5
LIMD2Q9BT23 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC11.94□□□□□ -0.5
LIMD2Q9BT23 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LIMD2Q9BT23 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
LIMD2Q9BT23 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
LIMD2Q9BT23 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
LIMD2Q9BT23 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LIMD2Q9BT23 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
LIMD2Q9BT23 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
LIMD2Q9BT23 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LIMD2Q9BT23 AC061975.6-201ENST00000579045 1553 ntBASIC11.94□□□□□ -0.5
LIMD2Q9BT23 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
LIMD2Q9BT23 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LIMD2Q9BT23 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms