Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
TRAF3IP1Q8TDR0 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRAF3IP1Q8TDR0 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21■□□□□ 0.95
TRAF3IP1Q8TDR0 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21■□□□□ 0.95
TRAF3IP1Q8TDR0 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21■□□□□ 0.95
TRAF3IP1Q8TDR0 AC016405.3-201ENST00000607710 860 ntBASIC21■□□□□ 0.95
TRAF3IP1Q8TDR0 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
TRAF3IP1Q8TDR0 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
TRAF3IP1Q8TDR0 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
TRAF3IP1Q8TDR0 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRAF3IP1Q8TDR0 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
TRAF3IP1Q8TDR0 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC21■□□□□ 0.95
TRAF3IP1Q8TDR0 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
TRAF3IP1Q8TDR0 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRAF3IP1Q8TDR0 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRAF3IP1Q8TDR0 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
TRAF3IP1Q8TDR0 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRAF3IP1Q8TDR0 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.99■□□□□ 0.95
TRAF3IP1Q8TDR0 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.99■□□□□ 0.95
TRAF3IP1Q8TDR0 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRAF3IP1Q8TDR0 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRAF3IP1Q8TDR0 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.99■□□□□ 0.95
TRAF3IP1Q8TDR0 AC087633.2-202ENST00000565166 1439 ntBASIC20.99■□□□□ 0.95
TRAF3IP1Q8TDR0 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRAF3IP1Q8TDR0 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRAF3IP1Q8TDR0 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.99■□□□□ 0.95
TRAF3IP1Q8TDR0 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRAF3IP1Q8TDR0 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.99■□□□□ 0.95
TRAF3IP1Q8TDR0 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.99■□□□□ 0.95
TRAF3IP1Q8TDR0 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.99■□□□□ 0.95
TRAF3IP1Q8TDR0 AL356652.1-201ENST00000615962 565 ntBASIC20.99■□□□□ 0.95
TRAF3IP1Q8TDR0 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRAF3IP1Q8TDR0 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRAF3IP1Q8TDR0 CYP21A1P-202ENST00000354927 1481 ntBASIC20.99■□□□□ 0.95
TRAF3IP1Q8TDR0 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRAF3IP1Q8TDR0 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRAF3IP1Q8TDR0 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRAF3IP1Q8TDR0 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.99■□□□□ 0.95
TRAF3IP1Q8TDR0 DPP3P2-201ENST00000416030 1696 ntBASIC20.99■□□□□ 0.95
TRAF3IP1Q8TDR0 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.98■□□□□ 0.95
TRAF3IP1Q8TDR0 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.98■□□□□ 0.95
TRAF3IP1Q8TDR0 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRAF3IP1Q8TDR0 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.98■□□□□ 0.95
TRAF3IP1Q8TDR0 AC099778.1-201ENST00000568593 1911 ntBASIC20.98■□□□□ 0.95
TRAF3IP1Q8TDR0 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRAF3IP1Q8TDR0 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TRAF3IP1Q8TDR0 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRAF3IP1Q8TDR0 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.98■□□□□ 0.95
TRAF3IP1Q8TDR0 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
TRAF3IP1Q8TDR0 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.98■□□□□ 0.95
TRAF3IP1Q8TDR0 DUX4L16-201ENST00000555130 1264 ntBASIC20.98■□□□□ 0.95
TRAF3IP1Q8TDR0 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
TRAF3IP1Q8TDR0 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
TRAF3IP1Q8TDR0 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRAF3IP1Q8TDR0 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.97■□□□□ 0.95
TRAF3IP1Q8TDR0 AC112907.3-201ENST00000577781 2400 ntBASIC20.97■□□□□ 0.95
TRAF3IP1Q8TDR0 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.97■□□□□ 0.95
TRAF3IP1Q8TDR0 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRAF3IP1Q8TDR0 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRAF3IP1Q8TDR0 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRAF3IP1Q8TDR0 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRAF3IP1Q8TDR0 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.97■□□□□ 0.95
TRAF3IP1Q8TDR0 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.97■□□□□ 0.95
TRAF3IP1Q8TDR0 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.97■□□□□ 0.95
TRAF3IP1Q8TDR0 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.97■□□□□ 0.95
TRAF3IP1Q8TDR0 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.97■□□□□ 0.95
TRAF3IP1Q8TDR0 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.97■□□□□ 0.95
TRAF3IP1Q8TDR0 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.97■□□□□ 0.95
TRAF3IP1Q8TDR0 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.97■□□□□ 0.95
TRAF3IP1Q8TDR0 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TRAF3IP1Q8TDR0 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRAF3IP1Q8TDR0 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRAF3IP1Q8TDR0 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRAF3IP1Q8TDR0 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRAF3IP1Q8TDR0 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRAF3IP1Q8TDR0 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRAF3IP1Q8TDR0 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRAF3IP1Q8TDR0 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
TRAF3IP1Q8TDR0 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TRAF3IP1Q8TDR0 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.97■□□□□ 0.95
TRAF3IP1Q8TDR0 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TRAF3IP1Q8TDR0 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRAF3IP1Q8TDR0 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRAF3IP1Q8TDR0 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
TRAF3IP1Q8TDR0 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
TRAF3IP1Q8TDR0 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRAF3IP1Q8TDR0 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
TRAF3IP1Q8TDR0 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.96■□□□□ 0.95
TRAF3IP1Q8TDR0 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
TRAF3IP1Q8TDR0 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRAF3IP1Q8TDR0 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRAF3IP1Q8TDR0 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
TRAF3IP1Q8TDR0 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRAF3IP1Q8TDR0 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
TRAF3IP1Q8TDR0 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRAF3IP1Q8TDR0 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRAF3IP1Q8TDR0 CNN2P6-201ENST00000439038 900 ntBASIC20.96■□□□□ 0.95
TRAF3IP1Q8TDR0 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRAF3IP1Q8TDR0 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRAF3IP1Q8TDR0 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms