Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 AL512408.1-201ENST00000569378 2000 ntBASIC19.44■□□□□ 0.7
LINC01555Q8NAE3 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.44■□□□□ 0.7
LINC01555Q8NAE3 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.44■□□□□ 0.7
LINC01555Q8NAE3 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LINC01555Q8NAE3 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.44■□□□□ 0.7
LINC01555Q8NAE3 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LINC01555Q8NAE3 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LINC01555Q8NAE3 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.44■□□□□ 0.7
LINC01555Q8NAE3 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.44■□□□□ 0.7
LINC01555Q8NAE3 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
LINC01555Q8NAE3 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
LINC01555Q8NAE3 AC023632.3-201ENST00000521633 145 ntBASIC19.44■□□□□ 0.7
LINC01555Q8NAE3 AC005829.2-201ENST00000571422 1056 ntBASIC19.44■□□□□ 0.7
LINC01555Q8NAE3 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
LINC01555Q8NAE3 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
LINC01555Q8NAE3 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LINC01555Q8NAE3 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LINC01555Q8NAE3 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LINC01555Q8NAE3 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LINC01555Q8NAE3 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
LINC01555Q8NAE3 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LINC01555Q8NAE3 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
LINC01555Q8NAE3 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LINC01555Q8NAE3 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.43■□□□□ 0.7
LINC01555Q8NAE3 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.43■□□□□ 0.7
LINC01555Q8NAE3 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.43■□□□□ 0.7
LINC01555Q8NAE3 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LINC01555Q8NAE3 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LINC01555Q8NAE3 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LINC01555Q8NAE3 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LINC01555Q8NAE3 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LINC01555Q8NAE3 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LINC01555Q8NAE3 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.43■□□□□ 0.7
LINC01555Q8NAE3 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.43■□□□□ 0.7
LINC01555Q8NAE3 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.43■□□□□ 0.7
LINC01555Q8NAE3 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.43■□□□□ 0.7
LINC01555Q8NAE3 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.43■□□□□ 0.7
LINC01555Q8NAE3 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.43■□□□□ 0.7
LINC01555Q8NAE3 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.43■□□□□ 0.7
LINC01555Q8NAE3 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LINC01555Q8NAE3 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LINC01555Q8NAE3 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.43■□□□□ 0.7
LINC01555Q8NAE3 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LINC01555Q8NAE3 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
LINC01555Q8NAE3 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LINC01555Q8NAE3 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LINC01555Q8NAE3 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
LINC01555Q8NAE3 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
LINC01555Q8NAE3 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.43■□□□□ 0.7
LINC01555Q8NAE3 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.43■□□□□ 0.7
LINC01555Q8NAE3 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.43■□□□□ 0.7
LINC01555Q8NAE3 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LINC01555Q8NAE3 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
LINC01555Q8NAE3 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.42■□□□□ 0.7
LINC01555Q8NAE3 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.42■□□□□ 0.7
LINC01555Q8NAE3 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
LINC01555Q8NAE3 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
LINC01555Q8NAE3 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
LINC01555Q8NAE3 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LINC01555Q8NAE3 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LINC01555Q8NAE3 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.42■□□□□ 0.7
LINC01555Q8NAE3 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
LINC01555Q8NAE3 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
LINC01555Q8NAE3 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.42■□□□□ 0.7
LINC01555Q8NAE3 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LINC01555Q8NAE3 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LINC01555Q8NAE3 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.42■□□□□ 0.7
LINC01555Q8NAE3 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
LINC01555Q8NAE3 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.42■□□□□ 0.7
LINC01555Q8NAE3 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LINC01555Q8NAE3 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LINC01555Q8NAE3 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LINC01555Q8NAE3 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.41■□□□□ 0.7
LINC01555Q8NAE3 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LINC01555Q8NAE3 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
LINC01555Q8NAE3 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
LINC01555Q8NAE3 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LINC01555Q8NAE3 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
LINC01555Q8NAE3 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LINC01555Q8NAE3 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
LINC01555Q8NAE3 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.41■□□□□ 0.7
LINC01555Q8NAE3 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.41■□□□□ 0.7
LINC01555Q8NAE3 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.41■□□□□ 0.7
LINC01555Q8NAE3 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LINC01555Q8NAE3 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LINC01555Q8NAE3 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.41■□□□□ 0.7
LINC01555Q8NAE3 SOX15-203ENST00000570788 1093 ntBASIC19.41■□□□□ 0.7
LINC01555Q8NAE3 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
LINC01555Q8NAE3 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LINC01555Q8NAE3 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LINC01555Q8NAE3 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.41■□□□□ 0.7
LINC01555Q8NAE3 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.41■□□□□ 0.7
LINC01555Q8NAE3 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LINC01555Q8NAE3 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.41■□□□□ 0.7
LINC01555Q8NAE3 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
LINC01555Q8NAE3 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.4■□□□□ 0.7
LINC01555Q8NAE3 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.4■□□□□ 0.7
LINC01555Q8NAE3 AL162377.1-201ENST00000618844 1793 ntBASIC19.4■□□□□ 0.7
LINC01555Q8NAE3 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LINC01555Q8NAE3 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms