Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SIX5Q8N196 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SIX5Q8N196 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.69■□□□□ 0.9
SIX5Q8N196 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.69■□□□□ 0.9
SIX5Q8N196 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SIX5Q8N196 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SIX5Q8N196 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SIX5Q8N196 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SIX5Q8N196 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SIX5Q8N196 AP002982.1-201ENST00000492365 877 ntBASIC20.69■□□□□ 0.9
SIX5Q8N196 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.69■□□□□ 0.9
SIX5Q8N196 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC20.69■□□□□ 0.9
SIX5Q8N196 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.69■□□□□ 0.9
SIX5Q8N196 AC087388.1-201ENST00000571370 1112 ntBASIC20.69■□□□□ 0.9
SIX5Q8N196 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.69■□□□□ 0.9
SIX5Q8N196 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SIX5Q8N196 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SIX5Q8N196 AC124283.5-201ENST00000624661 1809 ntBASIC20.69■□□□□ 0.9
SIX5Q8N196 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
SIX5Q8N196 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SIX5Q8N196 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SIX5Q8N196 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SIX5Q8N196 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.68■□□□□ 0.9
SIX5Q8N196 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SIX5Q8N196 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SIX5Q8N196 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SIX5Q8N196 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SIX5Q8N196 AL390955.1-201ENST00000428694 934 ntBASIC20.68■□□□□ 0.9
SIX5Q8N196 DUX4L26-201ENST00000489078 1255 ntBASIC20.68■□□□□ 0.9
SIX5Q8N196 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC20.68■□□□□ 0.9
SIX5Q8N196 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SIX5Q8N196 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
SIX5Q8N196 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.68■□□□□ 0.9
SIX5Q8N196 RBM42-202ENST00000586618 771 ntTSL 3 BASIC20.68■□□□□ 0.9
SIX5Q8N196 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SIX5Q8N196 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.68■□□□□ 0.9
SIX5Q8N196 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SIX5Q8N196 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.68■□□□□ 0.9
SIX5Q8N196 CYP2D8P-201ENST00000433633 1490 ntBASIC20.68■□□□□ 0.9
SIX5Q8N196 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SIX5Q8N196 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.68■□□□□ 0.9
SIX5Q8N196 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SIX5Q8N196 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SIX5Q8N196 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SIX5Q8N196 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.67■□□□□ 0.9
SIX5Q8N196 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SIX5Q8N196 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.67■□□□□ 0.9
SIX5Q8N196 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SIX5Q8N196 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
SIX5Q8N196 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
SIX5Q8N196 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
SIX5Q8N196 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.67■□□□□ 0.9
SIX5Q8N196 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SIX5Q8N196 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SIX5Q8N196 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SIX5Q8N196 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SIX5Q8N196 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SIX5Q8N196 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SIX5Q8N196 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SIX5Q8N196 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SIX5Q8N196 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.66■□□□□ 0.9
SIX5Q8N196 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SIX5Q8N196 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC20.66■□□□□ 0.9
SIX5Q8N196 WDR88-203ENST00000592765 651 ntTSL 5 BASIC20.66■□□□□ 0.9
SIX5Q8N196 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
SIX5Q8N196 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SIX5Q8N196 AC073508.3-201ENST00000619697 1419 ntBASIC20.66■□□□□ 0.9
SIX5Q8N196 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SIX5Q8N196 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.66■□□□□ 0.9
SIX5Q8N196 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SIX5Q8N196 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.66■□□□□ 0.9
SIX5Q8N196 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SIX5Q8N196 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SIX5Q8N196 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.66■□□□□ 0.9
SIX5Q8N196 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.66■□□□□ 0.9
SIX5Q8N196 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SIX5Q8N196 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SIX5Q8N196 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SIX5Q8N196 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SIX5Q8N196 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
SIX5Q8N196 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
SIX5Q8N196 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SIX5Q8N196 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SIX5Q8N196 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SIX5Q8N196 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
SIX5Q8N196 SLC25A3P1-201ENST00000443844 931 ntBASIC20.65■□□□□ 0.9
SIX5Q8N196 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.65■□□□□ 0.9
SIX5Q8N196 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.65■□□□□ 0.9
SIX5Q8N196 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.65■□□□□ 0.9
SIX5Q8N196 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.65■□□□□ 0.9
SIX5Q8N196 AC004264.1-201ENST00000608354 794 ntBASIC20.65■□□□□ 0.9
SIX5Q8N196 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.65■□□□□ 0.9
SIX5Q8N196 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SIX5Q8N196 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SIX5Q8N196 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SIX5Q8N196 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.64■□□□□ 0.89
SIX5Q8N196 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
SIX5Q8N196 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
SIX5Q8N196 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SIX5Q8N196 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms