Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
SCN4BQ8IWT1 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
SCN4BQ8IWT1 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SCN4BQ8IWT1 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.29■■□□□ 1
SCN4BQ8IWT1 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.28■■□□□ 1
SCN4BQ8IWT1 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SCN4BQ8IWT1 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SCN4BQ8IWT1 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC21.28■■□□□ 1
SCN4BQ8IWT1 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.28■■□□□ 1
SCN4BQ8IWT1 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
SCN4BQ8IWT1 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21.28■■□□□ 1
SCN4BQ8IWT1 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
SCN4BQ8IWT1 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC21.28■■□□□ 1
SCN4BQ8IWT1 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.28■■□□□ 1
SCN4BQ8IWT1 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
SCN4BQ8IWT1 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC21.28■■□□□ 1
SCN4BQ8IWT1 AC069544.1-201ENST00000609399 999 ntBASIC21.28■■□□□ 1
SCN4BQ8IWT1 AC120498.8-201ENST00000614275 531 ntBASIC21.28■■□□□ 1
SCN4BQ8IWT1 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.28■■□□□ 1
SCN4BQ8IWT1 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.28■■□□□ 1
SCN4BQ8IWT1 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.28■■□□□ 1
SCN4BQ8IWT1 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SCN4BQ8IWT1 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
SCN4BQ8IWT1 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SCN4BQ8IWT1 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.28■■□□□ 1
SCN4BQ8IWT1 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
SCN4BQ8IWT1 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
SCN4BQ8IWT1 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
SCN4BQ8IWT1 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SCN4BQ8IWT1 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SCN4BQ8IWT1 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
SCN4BQ8IWT1 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
SCN4BQ8IWT1 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SCN4BQ8IWT1 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC21.27■■□□□ 1
SCN4BQ8IWT1 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC21.27■■□□□ 1
SCN4BQ8IWT1 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.27■■□□□ 1
SCN4BQ8IWT1 THEM4-205ENST00000489410 643 ntTSL 2 BASIC21.27■■□□□ 1
SCN4BQ8IWT1 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
SCN4BQ8IWT1 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.27■■□□□ 1
SCN4BQ8IWT1 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
SCN4BQ8IWT1 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SCN4BQ8IWT1 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC21.27■■□□□ 1
SCN4BQ8IWT1 AC007225.1-201ENST00000566331 1836 ntBASIC21.27■□□□□ 0.99
SCN4BQ8IWT1 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
SCN4BQ8IWT1 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SCN4BQ8IWT1 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.26■□□□□ 0.99
SCN4BQ8IWT1 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SCN4BQ8IWT1 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
SCN4BQ8IWT1 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SCN4BQ8IWT1 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SCN4BQ8IWT1 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
SCN4BQ8IWT1 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
SCN4BQ8IWT1 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC21.26■□□□□ 0.99
SCN4BQ8IWT1 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
SCN4BQ8IWT1 C1QBPP2-201ENST00000528754 825 ntBASIC21.26■□□□□ 0.99
SCN4BQ8IWT1 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
SCN4BQ8IWT1 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SCN4BQ8IWT1 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC21.26■□□□□ 0.99
SCN4BQ8IWT1 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.26■□□□□ 0.99
SCN4BQ8IWT1 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
SCN4BQ8IWT1 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.26■□□□□ 0.99
SCN4BQ8IWT1 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.26■□□□□ 0.99
SCN4BQ8IWT1 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SCN4BQ8IWT1 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SCN4BQ8IWT1 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SCN4BQ8IWT1 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SCN4BQ8IWT1 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SCN4BQ8IWT1 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SCN4BQ8IWT1 PEX7-202ENST00000367756 680 ntTSL 3 BASIC21.25■□□□□ 0.99
SCN4BQ8IWT1 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SCN4BQ8IWT1 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SCN4BQ8IWT1 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.25■□□□□ 0.99
SCN4BQ8IWT1 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC21.25■□□□□ 0.99
SCN4BQ8IWT1 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC21.25■□□□□ 0.99
SCN4BQ8IWT1 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC21.25■□□□□ 0.99
SCN4BQ8IWT1 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.25■□□□□ 0.99
SCN4BQ8IWT1 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC21.25■□□□□ 0.99
SCN4BQ8IWT1 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
SCN4BQ8IWT1 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SCN4BQ8IWT1 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SCN4BQ8IWT1 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.25■□□□□ 0.99
SCN4BQ8IWT1 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.25■□□□□ 0.99
SCN4BQ8IWT1 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC21.25■□□□□ 0.99
SCN4BQ8IWT1 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SCN4BQ8IWT1 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.25■□□□□ 0.99
SCN4BQ8IWT1 AL137060.1-201ENST00000618151 2648 ntBASIC21.25■□□□□ 0.99
SCN4BQ8IWT1 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.24■□□□□ 0.99
SCN4BQ8IWT1 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SCN4BQ8IWT1 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
SCN4BQ8IWT1 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC21.24■□□□□ 0.99
SCN4BQ8IWT1 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SCN4BQ8IWT1 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SCN4BQ8IWT1 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SCN4BQ8IWT1 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC21.24■□□□□ 0.99
SCN4BQ8IWT1 AC093827.2-201ENST00000512654 315 ntBASIC21.24■□□□□ 0.99
SCN4BQ8IWT1 AC023632.3-201ENST00000521633 145 ntBASIC21.24■□□□□ 0.99
SCN4BQ8IWT1 RN7SL471P-201ENST00000580476 299 ntBASIC21.24■□□□□ 0.99
SCN4BQ8IWT1 AL359736.2-201ENST00000621992 437 ntBASIC21.24■□□□□ 0.99
SCN4BQ8IWT1 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
SCN4BQ8IWT1 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms