Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB43Q86YS6 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB43Q86YS6 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RAB43Q86YS6 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.21■□□□□ 0.67
RAB43Q86YS6 PGM5P4-201ENST00000421970 445 ntBASIC19.21■□□□□ 0.67
RAB43Q86YS6 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RAB43Q86YS6 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.21■□□□□ 0.67
RAB43Q86YS6 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
RAB43Q86YS6 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RAB43Q86YS6 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.21■□□□□ 0.67
RAB43Q86YS6 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
RAB43Q86YS6 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.21■□□□□ 0.67
RAB43Q86YS6 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.21■□□□□ 0.67
RAB43Q86YS6 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB43Q86YS6 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.21■□□□□ 0.67
RAB43Q86YS6 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RAB43Q86YS6 AL157384.1-201ENST00000445995 2473 ntBASIC19.2■□□□□ 0.66
RAB43Q86YS6 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
RAB43Q86YS6 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
RAB43Q86YS6 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAB43Q86YS6 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAB43Q86YS6 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
RAB43Q86YS6 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.2■□□□□ 0.66
RAB43Q86YS6 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.2■□□□□ 0.66
RAB43Q86YS6 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
RAB43Q86YS6 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.2■□□□□ 0.66
RAB43Q86YS6 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.2■□□□□ 0.66
RAB43Q86YS6 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.2■□□□□ 0.66
RAB43Q86YS6 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.2■□□□□ 0.66
RAB43Q86YS6 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAB43Q86YS6 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.2■□□□□ 0.66
RAB43Q86YS6 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.2■□□□□ 0.66
RAB43Q86YS6 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAB43Q86YS6 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAB43Q86YS6 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
RAB43Q86YS6 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RAB43Q86YS6 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RAB43Q86YS6 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
RAB43Q86YS6 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.19■□□□□ 0.66
RAB43Q86YS6 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.19■□□□□ 0.66
RAB43Q86YS6 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.19■□□□□ 0.66
RAB43Q86YS6 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
RAB43Q86YS6 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RAB43Q86YS6 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAB43Q86YS6 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
RAB43Q86YS6 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.19■□□□□ 0.66
RAB43Q86YS6 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RAB43Q86YS6 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
RAB43Q86YS6 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAB43Q86YS6 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAB43Q86YS6 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAB43Q86YS6 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAB43Q86YS6 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
RAB43Q86YS6 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.18■□□□□ 0.66
RAB43Q86YS6 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.18■□□□□ 0.66
RAB43Q86YS6 KRT17P3-201ENST00000420566 1262 ntBASIC19.18■□□□□ 0.66
RAB43Q86YS6 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.18■□□□□ 0.66
RAB43Q86YS6 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.18■□□□□ 0.66
RAB43Q86YS6 UNC93B4-201ENST00000505679 747 ntBASIC19.18■□□□□ 0.66
RAB43Q86YS6 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.18■□□□□ 0.66
RAB43Q86YS6 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
RAB43Q86YS6 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RAB43Q86YS6 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.18■□□□□ 0.66
RAB43Q86YS6 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RAB43Q86YS6 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAB43Q86YS6 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.18■□□□□ 0.66
RAB43Q86YS6 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
RAB43Q86YS6 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAB43Q86YS6 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB43Q86YS6 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB43Q86YS6 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.17■□□□□ 0.66
RAB43Q86YS6 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.17■□□□□ 0.66
RAB43Q86YS6 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
RAB43Q86YS6 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
RAB43Q86YS6 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
RAB43Q86YS6 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB43Q86YS6 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB43Q86YS6 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
RAB43Q86YS6 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.17■□□□□ 0.66
RAB43Q86YS6 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.17■□□□□ 0.66
RAB43Q86YS6 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RAB43Q86YS6 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.17■□□□□ 0.66
RAB43Q86YS6 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
RAB43Q86YS6 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.17■□□□□ 0.66
RAB43Q86YS6 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB43Q86YS6 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB43Q86YS6 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
RAB43Q86YS6 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
RAB43Q86YS6 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.17■□□□□ 0.66
RAB43Q86YS6 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.17■□□□□ 0.66
RAB43Q86YS6 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RAB43Q86YS6 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB43Q86YS6 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.16■□□□□ 0.66
RAB43Q86YS6 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
RAB43Q86YS6 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
RAB43Q86YS6 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB43Q86YS6 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB43Q86YS6 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB43Q86YS6 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RAB43Q86YS6 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms