Protein–RNA interactions for Protein: Q7L5N1

COPS6, COP9 signalosome complex subunit 6, humanhuman

Predictions only

Length 327 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6Q7L5N1 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC25.58■■□□□ 1.69
COPS6Q7L5N1 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
COPS6Q7L5N1 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
COPS6Q7L5N1 ARL16-209ENST00000573715 763 ntTSL 3 BASIC25.58■■□□□ 1.69
COPS6Q7L5N1 ARL16-211ENST00000576135 694 ntTSL 3 BASIC25.58■■□□□ 1.69
COPS6Q7L5N1 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC25.58■■□□□ 1.69
COPS6Q7L5N1 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
COPS6Q7L5N1 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
COPS6Q7L5N1 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
COPS6Q7L5N1 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
COPS6Q7L5N1 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC25.58■■□□□ 1.68
COPS6Q7L5N1 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC25.58■■□□□ 1.68
COPS6Q7L5N1 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
COPS6Q7L5N1 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
COPS6Q7L5N1 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC25.57■■□□□ 1.68
COPS6Q7L5N1 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
COPS6Q7L5N1 AC005229.4-201ENST00000610085 2198 ntBASIC25.57■■□□□ 1.68
COPS6Q7L5N1 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
COPS6Q7L5N1 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
COPS6Q7L5N1 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC25.57■■□□□ 1.68
COPS6Q7L5N1 MIR4497-201ENST00000583208 89 ntBASIC25.57■■□□□ 1.68
COPS6Q7L5N1 AC006128.1-201ENST00000624704 1661 ntBASIC25.57■■□□□ 1.68
COPS6Q7L5N1 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
COPS6Q7L5N1 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
COPS6Q7L5N1 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
COPS6Q7L5N1 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
COPS6Q7L5N1 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
COPS6Q7L5N1 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC25.56■■□□□ 1.68
COPS6Q7L5N1 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
COPS6Q7L5N1 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
COPS6Q7L5N1 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
COPS6Q7L5N1 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
COPS6Q7L5N1 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
COPS6Q7L5N1 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC25.56■■□□□ 1.68
COPS6Q7L5N1 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
COPS6Q7L5N1 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC25.56■■□□□ 1.68
COPS6Q7L5N1 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC25.56■■□□□ 1.68
COPS6Q7L5N1 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC25.56■■□□□ 1.68
COPS6Q7L5N1 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
COPS6Q7L5N1 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC25.56■■□□□ 1.68
COPS6Q7L5N1 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
COPS6Q7L5N1 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC25.55■■□□□ 1.68
COPS6Q7L5N1 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC25.55■■□□□ 1.68
COPS6Q7L5N1 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
COPS6Q7L5N1 H19-201ENST00000411754 1788 ntTSL 5 BASIC25.55■■□□□ 1.68
COPS6Q7L5N1 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC25.55■■□□□ 1.68
COPS6Q7L5N1 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
COPS6Q7L5N1 SNORA78-201ENST00000459373 127 ntBASIC25.55■■□□□ 1.68
COPS6Q7L5N1 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
COPS6Q7L5N1 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
COPS6Q7L5N1 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
COPS6Q7L5N1 REXO2-216ENST00000544196 452 ntTSL 3 BASIC25.55■■□□□ 1.68
COPS6Q7L5N1 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC25.55■■□□□ 1.68
COPS6Q7L5N1 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
COPS6Q7L5N1 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC25.55■■□□□ 1.68
COPS6Q7L5N1 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
COPS6Q7L5N1 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
COPS6Q7L5N1 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
COPS6Q7L5N1 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
COPS6Q7L5N1 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC25.54■■□□□ 1.68
COPS6Q7L5N1 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
COPS6Q7L5N1 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
COPS6Q7L5N1 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC25.54■■□□□ 1.68
COPS6Q7L5N1 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
COPS6Q7L5N1 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
COPS6Q7L5N1 RPS2P55-201ENST00000397318 883 ntBASIC25.54■■□□□ 1.68
COPS6Q7L5N1 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
COPS6Q7L5N1 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC25.54■■□□□ 1.68
COPS6Q7L5N1 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
COPS6Q7L5N1 AC107956.1-201ENST00000494359 873 ntBASIC25.54■■□□□ 1.68
COPS6Q7L5N1 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC25.54■■□□□ 1.68
COPS6Q7L5N1 Six3os1_6.1-201ENST00000620790 196 ntBASIC25.54■■□□□ 1.68
COPS6Q7L5N1 AL121829.2-201ENST00000620908 328 ntBASIC25.54■■□□□ 1.68
COPS6Q7L5N1 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC25.54■■□□□ 1.68
COPS6Q7L5N1 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
COPS6Q7L5N1 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
COPS6Q7L5N1 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
COPS6Q7L5N1 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
COPS6Q7L5N1 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
COPS6Q7L5N1 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
COPS6Q7L5N1 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
COPS6Q7L5N1 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
COPS6Q7L5N1 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC25.53■■□□□ 1.68
COPS6Q7L5N1 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
COPS6Q7L5N1 MDFI-202ENST00000373050 809 ntTSL 2 BASIC25.53■■□□□ 1.68
COPS6Q7L5N1 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
COPS6Q7L5N1 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC25.53■■□□□ 1.68
COPS6Q7L5N1 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC25.53■■□□□ 1.68
COPS6Q7L5N1 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC25.53■■□□□ 1.68
COPS6Q7L5N1 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC25.53■■□□□ 1.68
COPS6Q7L5N1 AC233702.5-201ENST00000584107 538 ntBASIC25.53■■□□□ 1.68
COPS6Q7L5N1 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
COPS6Q7L5N1 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
COPS6Q7L5N1 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC25.53■■□□□ 1.68
COPS6Q7L5N1 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC25.53■■□□□ 1.68
COPS6Q7L5N1 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC25.53■■□□□ 1.68
COPS6Q7L5N1 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
COPS6Q7L5N1 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
COPS6Q7L5N1 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
COPS6Q7L5N1 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC25.52■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms