Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DQA1Q5Y7H0 AC092720.2-201ENST00000602388 1665 ntBASIC18.8■□□□□ 0.6
HLA-DQA1Q5Y7H0 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DQA1Q5Y7H0 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DQA1Q5Y7H0 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.8■□□□□ 0.6
HLA-DQA1Q5Y7H0 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.8■□□□□ 0.6
HLA-DQA1Q5Y7H0 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DQA1Q5Y7H0 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.8■□□□□ 0.6
HLA-DQA1Q5Y7H0 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.8■□□□□ 0.6
HLA-DQA1Q5Y7H0 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.8■□□□□ 0.6
HLA-DQA1Q5Y7H0 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DQA1Q5Y7H0 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.8■□□□□ 0.6
HLA-DQA1Q5Y7H0 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
HLA-DQA1Q5Y7H0 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DQA1Q5Y7H0 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DQA1Q5Y7H0 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DQA1Q5Y7H0 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DQA1Q5Y7H0 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DQA1Q5Y7H0 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DQA1Q5Y7H0 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.79■□□□□ 0.6
HLA-DQA1Q5Y7H0 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DQA1Q5Y7H0 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DQA1Q5Y7H0 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
HLA-DQA1Q5Y7H0 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DQA1Q5Y7H0 AC073210.2-201ENST00000430369 194 ntBASIC18.79■□□□□ 0.6
HLA-DQA1Q5Y7H0 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.79■□□□□ 0.6
HLA-DQA1Q5Y7H0 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.79■□□□□ 0.6
HLA-DQA1Q5Y7H0 AC091874.3-201ENST00000512672 1195 ntBASIC18.79■□□□□ 0.6
HLA-DQA1Q5Y7H0 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.79■□□□□ 0.6
HLA-DQA1Q5Y7H0 HCG11-201ENST00000411553 5696 ntBASIC18.79■□□□□ 0.6
HLA-DQA1Q5Y7H0 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DQA1Q5Y7H0 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DQA1Q5Y7H0 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DQA1Q5Y7H0 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.79■□□□□ 0.6
HLA-DQA1Q5Y7H0 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DQA1Q5Y7H0 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.78■□□□□ 0.6
HLA-DQA1Q5Y7H0 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
HLA-DQA1Q5Y7H0 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DQA1Q5Y7H0 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DQA1Q5Y7H0 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DQA1Q5Y7H0 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.78■□□□□ 0.6
HLA-DQA1Q5Y7H0 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
HLA-DQA1Q5Y7H0 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DQA1Q5Y7H0 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
HLA-DQA1Q5Y7H0 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.78■□□□□ 0.6
HLA-DQA1Q5Y7H0 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DQA1Q5Y7H0 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
HLA-DQA1Q5Y7H0 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.78■□□□□ 0.6
HLA-DQA1Q5Y7H0 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.78■□□□□ 0.6
HLA-DQA1Q5Y7H0 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.78■□□□□ 0.6
HLA-DQA1Q5Y7H0 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DQA1Q5Y7H0 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DQA1Q5Y7H0 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.78■□□□□ 0.6
HLA-DQA1Q5Y7H0 C2orf69P4-201ENST00000565394 541 ntBASIC18.78■□□□□ 0.6
HLA-DQA1Q5Y7H0 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.78■□□□□ 0.6
HLA-DQA1Q5Y7H0 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
HLA-DQA1Q5Y7H0 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.78■□□□□ 0.6
HLA-DQA1Q5Y7H0 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
HLA-DQA1Q5Y7H0 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.78■□□□□ 0.6
HLA-DQA1Q5Y7H0 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DQA1Q5Y7H0 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
HLA-DQA1Q5Y7H0 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DQA1Q5Y7H0 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
HLA-DQA1Q5Y7H0 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DQA1Q5Y7H0 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.78■□□□□ 0.6
HLA-DQA1Q5Y7H0 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HLA-DQA1Q5Y7H0 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
HLA-DQA1Q5Y7H0 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.77■□□□□ 0.6
HLA-DQA1Q5Y7H0 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HLA-DQA1Q5Y7H0 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HLA-DQA1Q5Y7H0 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
HLA-DQA1Q5Y7H0 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HLA-DQA1Q5Y7H0 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HLA-DQA1Q5Y7H0 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HLA-DQA1Q5Y7H0 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
HLA-DQA1Q5Y7H0 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.77■□□□□ 0.6
HLA-DQA1Q5Y7H0 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.77■□□□□ 0.6
HLA-DQA1Q5Y7H0 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.77■□□□□ 0.6
HLA-DQA1Q5Y7H0 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.77■□□□□ 0.6
HLA-DQA1Q5Y7H0 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.77■□□□□ 0.6
HLA-DQA1Q5Y7H0 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HLA-DQA1Q5Y7H0 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
HLA-DQA1Q5Y7H0 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HLA-DQA1Q5Y7H0 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HLA-DQA1Q5Y7H0 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
HLA-DQA1Q5Y7H0 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HLA-DQA1Q5Y7H0 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
HLA-DQA1Q5Y7H0 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
HLA-DQA1Q5Y7H0 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.77■□□□□ 0.59
HLA-DQA1Q5Y7H0 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.77■□□□□ 0.59
HLA-DQA1Q5Y7H0 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
HLA-DQA1Q5Y7H0 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
HLA-DQA1Q5Y7H0 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.76■□□□□ 0.59
HLA-DQA1Q5Y7H0 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.76■□□□□ 0.59
HLA-DQA1Q5Y7H0 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.76■□□□□ 0.59
HLA-DQA1Q5Y7H0 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HLA-DQA1Q5Y7H0 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.76■□□□□ 0.59
HLA-DQA1Q5Y7H0 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.76■□□□□ 0.59
HLA-DQA1Q5Y7H0 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.76■□□□□ 0.59
HLA-DQA1Q5Y7H0 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms