Protein–RNA interactions for Protein: Q08964

YPL216W, Putative ISWI chromatin-remodeling complex subunit YPL216W, yeastyeast

Predictions only

Length 1,102 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YPL216WQ08964 GRR1YJR090C 3456 nt2.24□□□□□ -2.05
YPL216WQ08964 UBR1YGR184C 5853 nt2.24□□□□□ -2.05
YPL216WQ08964 NUP170YBL079W 4509 nt2.23□□□□□ -2.05
YPL216WQ08964 UFD4YKL010C 4452 nt2.23□□□□□ -2.05
YPL216WQ08964 EFR3YMR212C 2349 nt2.23□□□□□ -2.05
YPL216WQ08964 YDR286CYDR286C 345 nt2.23□□□□□ -2.05
YPL216WQ08964 YPR002C-AYPR002C-A 198 nt2.23□□□□□ -2.05
YPL216WQ08964 YCL023CYCL023C 348 nt2.23□□□□□ -2.05
YPL216WQ08964 VPH1YOR270C 2523 nt2.23□□□□□ -2.05
YPL216WQ08964 SET2YJL168C 2202 nt2.22□□□□□ -2.05
YPL216WQ08964 SCW11YGL028C 1629 nt2.22□□□□□ -2.05
YPL216WQ08964 YHR180W-AYHR180W-A 183 nt2.22□□□□□ -2.05
YPL216WQ08964 EDS1YBR033W 2760 nt2.21□□□□□ -2.05
YPL216WQ08964 MNL2YLR057W 2550 nt2.21□□□□□ -2.06
YPL216WQ08964 RPH1YER169W 2391 nt2.21□□□□□ -2.06
YPL216WQ08964 snR60snR60 104 nt2.21□□□□□ -2.06
YPL216WQ08964 YGR250CYGR250C 2346 nt2.21□□□□□ -2.06
YPL216WQ08964 RPL42BYHR141C 321 nt2.21□□□□□ -2.06
YPL216WQ08964 TRX1YLR043C 312 nt2.21□□□□□ -2.06
YPL216WQ08964 YMR172C-AYMR172C-A 384 nt2.21□□□□□ -2.06
YPL216WQ08964 RPL42AYNL162W 321 nt2.21□□□□□ -2.06
YPL216WQ08964 YOL155W-AYOL155W-A 135 nt2.21□□□□□ -2.06
YPL216WQ08964 KOG1YHR186C 4674 nt2.2□□□□□ -2.06
YPL216WQ08964 MET18YIL128W 3099 nt2.2□□□□□ -2.06
YPL216WQ08964 SSQ1YLR369W 1974 nt2.19□□□□□ -2.06
YPL216WQ08964 Q0032Q0032 291 nt2.19□□□□□ -2.06
YPL216WQ08964 YCR043CYCR043C 384 nt2.19□□□□□ -2.06
YPL216WQ08964 APQ12YIL040W 417 nt2.19□□□□□ -2.06
YPL216WQ08964 NUP100YKL068W 2880 nt2.19□□□□□ -2.06
YPL216WQ08964 PLC1YPL268W 2610 nt2.19□□□□□ -2.06
YPL216WQ08964 SNF5YBR289W 2718 nt2.19□□□□□ -2.06
YPL216WQ08964 CFT2YLR115W 2580 nt2.18□□□□□ -2.06
YPL216WQ08964 ATG11YPR049C 3537 nt2.18□□□□□ -2.06
YPL216WQ08964 YFR016CYFR016C 3702 nt2.18□□□□□ -2.06
YPL216WQ08964 TIM9YEL020W-A 264 nt2.18□□□□□ -2.06
YPL216WQ08964 YGL007C-AYGL007C-A 87 nt2.18□□□□□ -2.06
YPL216WQ08964 PAU8YAL068C 363 nt2.18□□□□□ -2.06
YPL216WQ08964 PAU20YOL161C 363 nt2.18□□□□□ -2.06
YPL216WQ08964 VPS8YAL002W 3825 nt2.18□□□□□ -2.06
YPL216WQ08964 SLM1YIL105C 2061 nt2.18□□□□□ -2.06
YPL216WQ08964 RGA1YOR127W 3024 nt2.17□□□□□ -2.06
YPL216WQ08964 ZRG8YER033C 3231 nt2.17□□□□□ -2.06
YPL216WQ08964 NPR2YEL062W 1848 nt2.17□□□□□ -2.06
YPL216WQ08964 BNI1YNL271C 5862 nt2.17□□□□□ -2.06
YPL216WQ08964 YDR406W-AYDR406W-A 246 nt2.17□□□□□ -2.06
YPL216WQ08964 YLR154W-AYLR154W-A 186 nt2.17□□□□□ -2.06
YPL216WQ08964 CYB5YNL111C 363 nt2.17□□□□□ -2.06
YPL216WQ08964 LCD1YDR499W 2244 nt2.17□□□□□ -2.06
YPL216WQ08964 INP2YMR163C 2118 nt2.17□□□□□ -2.06
YPL216WQ08964 RAV1YJR033C 4074 nt2.16□□□□□ -2.06
YPL216WQ08964 YCK3YER123W 1575 nt2.16□□□□□ -2.06
YPL216WQ08964 SSS1YDR086C 243 nt2.16□□□□□ -2.06
YPL216WQ08964 INA22YIR024C 651 nt2.16□□□□□ -2.06
YPL216WQ08964 PAU18YLL064C 363 nt2.16□□□□□ -2.06
YPL216WQ08964 PAU6YNR076W 363 nt2.16□□□□□ -2.06
YPL216WQ08964 YOR015WYOR015W 360 nt2.16□□□□□ -2.06
YPL216WQ08964 MUK1YPL070W 1839 nt2.16□□□□□ -2.06
YPL216WQ08964 GIP3YPL137C 3831 nt2.16□□□□□ -2.06
YPL216WQ08964 INO80YGL150C 4470 nt2.15□□□□□ -2.06
YPL216WQ08964 PAM16YJL104W 450 nt2.15□□□□□ -2.07
YPL216WQ08964 RPS17AYML024W 411 nt2.15□□□□□ -2.07
YPL216WQ08964 RFX1YLR176C 2436 nt2.15□□□□□ -2.07
YPL216WQ08964 TUS1YLR425W 3924 nt2.14□□□□□ -2.07
YPL216WQ08964 snR55snR55 98 nt2.14□□□□□ -2.07
YPL216WQ08964 YJL135WYJL135W 318 nt2.14□□□□□ -2.07
YPL216WQ08964 YJL197C-AYJL197C-A 282 nt2.14□□□□□ -2.07
YPL216WQ08964 YLR120W-AYLR120W-A 102 nt2.14□□□□□ -2.07
YPL216WQ08964 IES4YOR189W 351 nt2.14□□□□□ -2.07
YPL216WQ08964 STH1YIL126W 4080 nt2.14□□□□□ -2.07
YPL216WQ08964 MNE1YOR350C 1992 nt2.14□□□□□ -2.07
YPL216WQ08964 SWI5YDR146C 2130 nt2.14□□□□□ -2.07
YPL216WQ08964 YPR097WYPR097W 3222 nt2.13□□□□□ -2.07
YPL216WQ08964 YGL052WYGL052W 306 nt2.13□□□□□ -2.07
YPL216WQ08964 GPG1YGL121C 381 nt2.13□□□□□ -2.07
YPL216WQ08964 YNL028WYNL028W 318 nt2.13□□□□□ -2.07
YPL216WQ08964 CSE2YNR010W 450 nt2.13□□□□□ -2.07
YPL216WQ08964 SWI6YLR182W 2412 nt2.13□□□□□ -2.07
YPL216WQ08964 MPT5YGL178W 2580 nt2.13□□□□□ -2.07
YPL216WQ08964 NIP100YPL174C 2607 nt2.12□□□□□ -2.07
YPL216WQ08964 LYS14YDR034C 2373 nt2.12□□□□□ -2.07
YPL216WQ08964 tF(GAA)QtF(GAA)Q 75 nt2.12□□□□□ -2.07
YPL216WQ08964 YNL198CYNL198C 303 nt2.12□□□□□ -2.07
YPL216WQ08964 YOR302WYOR302W 78 nt2.12□□□□□ -2.07
YPL216WQ08964 VIK1YPL253C 1944 nt2.11□□□□□ -2.07
YPL216WQ08964 GYP5YPL249C 2685 nt2.11□□□□□ -2.07
YPL216WQ08964 snR72snR72 98 nt2.11□□□□□ -2.07
YPL216WQ08964 YBL012CYBL012C 402 nt2.11□□□□□ -2.07
YPL216WQ08964 YCL046WYCL046W 324 nt2.11□□□□□ -2.07
YPL216WQ08964 USO1YDL058W 5373 nt2.1□□□□□ -2.07
YPL216WQ08964 PAU2YEL049W 363 nt2.1□□□□□ -2.07
YPL216WQ08964 YHR073W-AYHR073W-A 177 nt2.1□□□□□ -2.07
YPL216WQ08964 YMR307C-AYMR307C-A 195 nt2.1□□□□□ -2.07
YPL216WQ08964 YMR321CYMR321C 318 nt2.1□□□□□ -2.07
YPL216WQ08964 COS111YBR203W 2775 nt2.1□□□□□ -2.07
YPL216WQ08964 HSL1YKL101W 4557 nt2.09□□□□□ -2.07
YPL216WQ08964 YMR230W-AYMR230W-A 189 nt2.09□□□□□ -2.07
YPL216WQ08964 SPT21YMR179W 2277 nt2.08□□□□□ -2.08
YPL216WQ08964 SEC31YDL195W 3822 nt2.08□□□□□ -2.08
YPL216WQ08964 PFD1YJL179W 330 nt2.08□□□□□ -2.08
YPL216WQ08964 RPB10YOR210W 213 nt2.08□□□□□ -2.08
Retrieved 100 of 7,029 protein–RNA pairs in 18.1 ms