Protein–RNA interactions for Protein: Q00416

SEN1, Helicase SEN1, yeastyeast

Known RBP Predictions only

Length 2,231 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SEN1Q00416 YDL187CYDL187C 330 nt-0.17□□□□□ -2.44
SEN1Q00416 YOL024WYOL024W 519 nt-0.17□□□□□ -2.44
SEN1Q00416 CSM4YPL200W 471 nt-0.17□□□□□ -2.44
SEN1Q00416 YDR199WYDR199W 366 nt-0.17□□□□□ -2.44
SEN1Q00416 YJL114WYJL114W 681 nt-0.17□□□□□ -2.44
SEN1Q00416 YNL150WYNL150W 408 nt-0.17□□□□□ -2.44
SEN1Q00416 SSS1YDR086C 243 nt-0.18□□□□□ -2.44
SEN1Q00416 CHZ1YER030W 462 nt-0.18□□□□□ -2.44
SEN1Q00416 YER158W-AYER158W-A 216 nt-0.18□□□□□ -2.44
SEN1Q00416 CCE1YKL011C 1062 nt-0.18□□□□□ -2.44
SEN1Q00416 RUF22RUF22 515 nt-0.18□□□□□ -2.44
SEN1Q00416 YOR105WYOR105W 327 nt-0.18□□□□□ -2.44
SEN1Q00416 YDR210WYDR210W 228 nt-0.19□□□□□ -2.44
SEN1Q00416 YER046W-AYER046W-A 330 nt-0.19□□□□□ -2.44
SEN1Q00416 ALG13YGL047W 609 nt-0.19□□□□□ -2.44
SEN1Q00416 YGR042WYGR042W 816 nt-0.19□□□□□ -2.44
SEN1Q00416 VPS28YPL065W 729 nt-0.19□□□□□ -2.44
SEN1Q00416 tT(UGU)G1tT(UGU)G1 72 nt-0.19□□□□□ -2.44
SEN1Q00416 tT(UGU)G2tT(UGU)G2 72 nt-0.19□□□□□ -2.44
SEN1Q00416 tT(UGU)PtT(UGU)P 72 nt-0.19□□□□□ -2.44
SEN1Q00416 YIR018C-AYIR018C-A 138 nt-0.19□□□□□ -2.44
SEN1Q00416 YJL156W-AYJL156W-A 222 nt-0.19□□□□□ -2.44
SEN1Q00416 KAR1YNL188W 1302 nt-0.2□□□□□ -2.44
SEN1Q00416 MMS2YGL087C 414 nt-0.2□□□□□ -2.44
SEN1Q00416 YKL065W-AYKL065W-A 222 nt-0.2□□□□□ -2.44
SEN1Q00416 PHO80YOL001W 882 nt-0.2□□□□□ -2.44
SEN1Q00416 ALY2YJL084C 3141 nt-0.2□□□□□ -2.44
SEN1Q00416 GIC2YDR309C 1152 nt-0.21□□□□□ -2.44
SEN1Q00416 YBL068W-AYBL068W-A 237 nt-0.21□□□□□ -2.44
SEN1Q00416 SPO11YHL022C 1197 nt-0.21□□□□□ -2.44
SEN1Q00416 CRG1YHR209W 876 nt-0.22□□□□□ -2.44
SEN1Q00416 YIR030W-AYIR030W-A 384 nt-0.22□□□□□ -2.44
SEN1Q00416 NEJ1YLR265C 1029 nt-0.22□□□□□ -2.44
SEN1Q00416 YPL197CYPL197C 414 nt-0.22□□□□□ -2.44
SEN1Q00416 NUP120YKL057C 3114 nt-0.22□□□□□ -2.44
SEN1Q00416 EFR3YMR212C 2349 nt-0.22□□□□□ -2.44
SEN1Q00416 NTF2YER009W 378 nt-0.22□□□□□ -2.45
SEN1Q00416 VMA21YGR105W 234 nt-0.22□□□□□ -2.45
SEN1Q00416 YHL048C-AYHL048C-A 135 nt-0.22□□□□□ -2.45
SEN1Q00416 SUT2YPR009W 807 nt-0.22□□□□□ -2.45
SEN1Q00416 YBR071WYBR071W 636 nt-0.22□□□□□ -2.45
SEN1Q00416 PRP42YDR235W 1635 nt-0.22□□□□□ -2.45
SEN1Q00416 YNL050CYNL050C 813 nt-0.23□□□□□ -2.45
SEN1Q00416 snR8snR8 190 nt-0.23□□□□□ -2.45
SEN1Q00416 YPL044CYPL044C 549 nt-0.23□□□□□ -2.45
SEN1Q00416 YDR194W-AYDR194W-A 153 nt-0.25□□□□□ -2.45
SEN1Q00416 YKE2YLR200W 345 nt-0.25□□□□□ -2.45
SEN1Q00416 RTC6YPL183W-A 282 nt-0.25□□□□□ -2.45
SEN1Q00416 AI5_ALPHAQ0070 1893 nt-0.26□□□□□ -2.45
SEN1Q00416 YDL009CYDL009C 324 nt-0.26□□□□□ -2.45
SEN1Q00416 GOS1YHL031C 672 nt-0.26□□□□□ -2.45
SEN1Q00416 YNL162W-AYNL162W-A 219 nt-0.26□□□□□ -2.45
SEN1Q00416 RFA3YJL173C 369 nt-0.27□□□□□ -2.45
SEN1Q00416 TIM8YJR135W-A 264 nt-0.27□□□□□ -2.45
SEN1Q00416 PTP2YOR208W 2253 nt-0.27□□□□□ -2.45
SEN1Q00416 SEC10YLR166C 2616 nt-0.27□□□□□ -2.45
SEN1Q00416 SBH2YER019C-A 267 nt-0.28□□□□□ -2.45
SEN1Q00416 YJR141WYJR141W 1044 nt-0.28□□□□□ -2.45
SEN1Q00416 SRP14YDL092W 441 nt-0.28□□□□□ -2.45
SEN1Q00416 FAR3YMR052W 615 nt-0.28□□□□□ -2.45
SEN1Q00416 RPS16AYMR143W 432 nt-0.28□□□□□ -2.45
SEN1Q00416 YPR170W-AYPR170W-A 186 nt-0.28□□□□□ -2.45
SEN1Q00416 TIM13YGR181W 318 nt-0.29□□□□□ -2.46
SEN1Q00416 YGR265WYGR265W 411 nt-0.29□□□□□ -2.46
SEN1Q00416 RRT1YBL048W 312 nt-0.29□□□□□ -2.46
SEN1Q00416 YNL146WYNL146W 303 nt-0.29□□□□□ -2.46
SEN1Q00416 RPB10YOR210W 213 nt-0.29□□□□□ -2.46
SEN1Q00416 YMR141W-AYMR141W-A 225 nt-0.29□□□□□ -2.46
SEN1Q00416 MUM2YBR057C 1101 nt-0.29□□□□□ -2.46
SEN1Q00416 YDR008CYDR008C 351 nt-0.3□□□□□ -2.46
SEN1Q00416 YEL073CYEL073C 324 nt-0.3□□□□□ -2.46
SEN1Q00416 YPR142CYPR142C 564 nt-0.3□□□□□ -2.46
SEN1Q00416 BI3Q0115 1554 nt-0.31□□□□□ -2.46
SEN1Q00416 YHL042WYHL042W 453 nt-0.31□□□□□ -2.46
SEN1Q00416 BI4Q0120 1917 nt-0.31□□□□□ -2.46
SEN1Q00416 DAD1YDR016C 285 nt-0.32□□□□□ -2.46
SEN1Q00416 YLR271WYLR271W 825 nt-0.32□□□□□ -2.46
SEN1Q00416 YPR172WYPR172W 603 nt-0.32□□□□□ -2.46
SEN1Q00416 RAD61YDR014W 1944 nt-0.32□□□□□ -2.46
SEN1Q00416 RFX1YLR176C 2436 nt-0.32□□□□□ -2.46
SEN1Q00416 YKU70YMR284W 1809 nt-0.32□□□□□ -2.46
SEN1Q00416 OLI1Q0130 231 nt-0.32□□□□□ -2.46
SEN1Q00416 YJR011CYJR011C 786 nt-0.32□□□□□ -2.46
SEN1Q00416 RPS27AYKL156W 249 nt-0.32□□□□□ -2.46
SEN1Q00416 CDC33YOL139C 642 nt-0.32□□□□□ -2.46
SEN1Q00416 MCM10YIL150C 1716 nt-0.33□□□□□ -2.46
SEN1Q00416 YCR038W-AYCR038W-A 126 nt-0.33□□□□□ -2.46
SEN1Q00416 RSM18YER050C 417 nt-0.33□□□□□ -2.46
SEN1Q00416 NFU1YKL040C 771 nt-0.33□□□□□ -2.46
SEN1Q00416 YOP1YPR028W 543 nt-0.33□□□□□ -2.46
SEN1Q00416 MIC19YFR011C 513 nt-0.33□□□□□ -2.46
SEN1Q00416 TIM10YHR005C-A 282 nt-0.33□□□□□ -2.46
SEN1Q00416 YJL135WYJL135W 318 nt-0.33□□□□□ -2.46
SEN1Q00416 ATP15YPL271W 189 nt-0.34□□□□□ -2.46
SEN1Q00416 snR24snR24 89 nt-0.34□□□□□ -2.46
SEN1Q00416 snR36snR36 182 nt-0.34□□□□□ -2.46
SEN1Q00416 snR128snR128 126 nt-0.34□□□□□ -2.46
SEN1Q00416 RCO1YMR075W 2055 nt-0.35□□□□□ -2.47
SEN1Q00416 YDR182W-AYDR182W-A 204 nt-0.35□□□□□ -2.47
SEN1Q00416 YKL115CYKL115C 393 nt-0.35□□□□□ -2.47
Retrieved 100 of 7,029 protein–RNA pairs in 22.4 ms