Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.89■□□□□ 0.93
IRX4P78413 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
IRX4P78413 AP006587.3-201ENST00000525742 1516 ntBASIC20.88■□□□□ 0.93
IRX4P78413 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
IRX4P78413 PCDHAC2-203ENST00000615316 3011 ntBASIC20.88■□□□□ 0.93
IRX4P78413 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
IRX4P78413 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
IRX4P78413 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
IRX4P78413 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
IRX4P78413 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
IRX4P78413 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.88■□□□□ 0.93
IRX4P78413 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.88■□□□□ 0.93
IRX4P78413 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.88■□□□□ 0.93
IRX4P78413 UNC93B5-201ENST00000530315 699 ntBASIC20.88■□□□□ 0.93
IRX4P78413 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.88■□□□□ 0.93
IRX4P78413 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.88■□□□□ 0.93
IRX4P78413 AL591742.1-201ENST00000604433 565 ntBASIC20.88■□□□□ 0.93
IRX4P78413 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
IRX4P78413 AC073648.6-201ENST00000641589 218 ntBASIC20.88■□□□□ 0.93
IRX4P78413 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
IRX4P78413 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.88■□□□□ 0.93
IRX4P78413 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
IRX4P78413 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.88■□□□□ 0.93
IRX4P78413 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.88■□□□□ 0.93
IRX4P78413 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
IRX4P78413 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.88■□□□□ 0.93
IRX4P78413 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
IRX4P78413 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
IRX4P78413 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
IRX4P78413 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
IRX4P78413 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
IRX4P78413 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
IRX4P78413 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
IRX4P78413 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
IRX4P78413 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
IRX4P78413 AL391422.3-201ENST00000603791 2761 ntBASIC20.87■□□□□ 0.93
IRX4P78413 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
IRX4P78413 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
IRX4P78413 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
IRX4P78413 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
IRX4P78413 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
IRX4P78413 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.87■□□□□ 0.93
IRX4P78413 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.87■□□□□ 0.93
IRX4P78413 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.87■□□□□ 0.93
IRX4P78413 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.87■□□□□ 0.93
IRX4P78413 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
IRX4P78413 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.87■□□□□ 0.93
IRX4P78413 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
IRX4P78413 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
IRX4P78413 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
IRX4P78413 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.86■□□□□ 0.93
IRX4P78413 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.86■□□□□ 0.93
IRX4P78413 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
IRX4P78413 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.86■□□□□ 0.93
IRX4P78413 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.86■□□□□ 0.93
IRX4P78413 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
IRX4P78413 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
IRX4P78413 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.86■□□□□ 0.93
IRX4P78413 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
IRX4P78413 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.86■□□□□ 0.93
IRX4P78413 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
IRX4P78413 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
IRX4P78413 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
IRX4P78413 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.86■□□□□ 0.93
IRX4P78413 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
IRX4P78413 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
IRX4P78413 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
IRX4P78413 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
IRX4P78413 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
IRX4P78413 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
IRX4P78413 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
IRX4P78413 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
IRX4P78413 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.85■□□□□ 0.93
IRX4P78413 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
IRX4P78413 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.85■□□□□ 0.93
IRX4P78413 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
IRX4P78413 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
IRX4P78413 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
IRX4P78413 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
IRX4P78413 AC008550.1-201ENST00000511500 884 ntBASIC20.85■□□□□ 0.93
IRX4P78413 AP003097.1-201ENST00000530657 1135 ntBASIC20.85■□□□□ 0.93
IRX4P78413 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.85■□□□□ 0.93
IRX4P78413 AL162412.1-201ENST00000567129 965 ntBASIC20.85■□□□□ 0.93
IRX4P78413 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.85■□□□□ 0.93
IRX4P78413 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
IRX4P78413 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.85■□□□□ 0.93
IRX4P78413 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
IRX4P78413 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
IRX4P78413 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
IRX4P78413 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.85■□□□□ 0.93
IRX4P78413 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
IRX4P78413 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
IRX4P78413 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
IRX4P78413 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
IRX4P78413 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
IRX4P78413 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
IRX4P78413 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
IRX4P78413 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
IRX4P78413 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
IRX4P78413 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms