Protein–RNA interactions for Protein: P63173

RPL38, 60S ribosomal protein L38, humanhuman

Known RBP Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL38P63173 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.7
RPL38P63173 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RPL38P63173 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.39■□□□□ 0.7
RPL38P63173 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.39■□□□□ 0.7
RPL38P63173 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RPL38P63173 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RPL38P63173 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.39■□□□□ 0.69
RPL38P63173 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPL38P63173 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPL38P63173 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.39■□□□□ 0.69
RPL38P63173 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RPL38P63173 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPL38P63173 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RPL38P63173 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.39■□□□□ 0.69
RPL38P63173 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPL38P63173 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
RPL38P63173 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPL38P63173 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RPL38P63173 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RPL38P63173 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPL38P63173 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPL38P63173 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
RPL38P63173 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RPL38P63173 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.39■□□□□ 0.69
RPL38P63173 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPL38P63173 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPL38P63173 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPL38P63173 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RPL38P63173 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPL38P63173 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPL38P63173 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.38■□□□□ 0.69
RPL38P63173 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPL38P63173 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPL38P63173 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPL38P63173 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPL38P63173 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RPL38P63173 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPL38P63173 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPL38P63173 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPL38P63173 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPL38P63173 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
RPL38P63173 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPL38P63173 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RPL38P63173 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPL38P63173 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.38■□□□□ 0.69
RPL38P63173 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.38■□□□□ 0.69
RPL38P63173 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.38■□□□□ 0.69
RPL38P63173 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.38■□□□□ 0.69
RPL38P63173 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RPL38P63173 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.38■□□□□ 0.69
RPL38P63173 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RPL38P63173 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RPL38P63173 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RPL38P63173 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RPL38P63173 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
RPL38P63173 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RPL38P63173 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.37■□□□□ 0.69
RPL38P63173 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RPL38P63173 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.37■□□□□ 0.69
RPL38P63173 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
RPL38P63173 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RPL38P63173 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
RPL38P63173 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
RPL38P63173 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
RPL38P63173 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
RPL38P63173 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RPL38P63173 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.37■□□□□ 0.69
RPL38P63173 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.37■□□□□ 0.69
RPL38P63173 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RPL38P63173 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.37■□□□□ 0.69
RPL38P63173 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.37■□□□□ 0.69
RPL38P63173 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.37■□□□□ 0.69
RPL38P63173 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.37■□□□□ 0.69
RPL38P63173 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.37■□□□□ 0.69
RPL38P63173 NTF6G-201ENST00000591094 616 ntBASIC19.37■□□□□ 0.69
RPL38P63173 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
RPL38P63173 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.37■□□□□ 0.69
RPL38P63173 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.37■□□□□ 0.69
RPL38P63173 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.37■□□□□ 0.69
RPL38P63173 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RPL38P63173 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.37■□□□□ 0.69
RPL38P63173 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.37■□□□□ 0.69
RPL38P63173 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RPL38P63173 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPL38P63173 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.36■□□□□ 0.69
RPL38P63173 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPL38P63173 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPL38P63173 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
RPL38P63173 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPL38P63173 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPL38P63173 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
RPL38P63173 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPL38P63173 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
RPL38P63173 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.36■□□□□ 0.69
RPL38P63173 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.36■□□□□ 0.69
RPL38P63173 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.36■□□□□ 0.69
RPL38P63173 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
RPL38P63173 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RPL38P63173 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RPL38P63173 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms