Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SPCS3P61009 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SPCS3P61009 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SPCS3P61009 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
SPCS3P61009 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
SPCS3P61009 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SPCS3P61009 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
SPCS3P61009 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC16.35■□□□□ 0.21
SPCS3P61009 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC16.35■□□□□ 0.21
SPCS3P61009 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SPCS3P61009 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SPCS3P61009 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC16.35■□□□□ 0.21
SPCS3P61009 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC16.35■□□□□ 0.21
SPCS3P61009 AL358852.1-201ENST00000623174 1268 ntBASIC16.35■□□□□ 0.21
SPCS3P61009 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SPCS3P61009 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SPCS3P61009 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SPCS3P61009 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SPCS3P61009 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SPCS3P61009 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SPCS3P61009 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
SPCS3P61009 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
SPCS3P61009 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC16.35■□□□□ 0.21
SPCS3P61009 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SPCS3P61009 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SPCS3P61009 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SPCS3P61009 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC16.34■□□□□ 0.21
SPCS3P61009 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC16.34■□□□□ 0.21
SPCS3P61009 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SPCS3P61009 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SPCS3P61009 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SPCS3P61009 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SPCS3P61009 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SPCS3P61009 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC16.34■□□□□ 0.21
SPCS3P61009 MTURN-203ENST00000409688 843 ntTSL 2 BASIC16.34■□□□□ 0.21
SPCS3P61009 PEMT-206ENST00000435340 960 ntTSL 5 BASIC16.34■□□□□ 0.21
SPCS3P61009 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC16.34■□□□□ 0.21
SPCS3P61009 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC16.34■□□□□ 0.21
SPCS3P61009 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SPCS3P61009 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SPCS3P61009 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC16.34■□□□□ 0.21
SPCS3P61009 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC16.34■□□□□ 0.21
SPCS3P61009 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
SPCS3P61009 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SPCS3P61009 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SPCS3P61009 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.34■□□□□ 0.21
SPCS3P61009 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SPCS3P61009 AC120498.9-201ENST00000339021 3867 ntBASIC16.34■□□□□ 0.21
SPCS3P61009 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
SPCS3P61009 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
SPCS3P61009 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
SPCS3P61009 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SPCS3P61009 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC16.33■□□□□ 0.21
SPCS3P61009 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC16.33■□□□□ 0.21
SPCS3P61009 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC16.33■□□□□ 0.21
SPCS3P61009 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
SPCS3P61009 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SPCS3P61009 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SPCS3P61009 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
SPCS3P61009 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SPCS3P61009 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
SPCS3P61009 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SPCS3P61009 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SPCS3P61009 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SPCS3P61009 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
SPCS3P61009 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC16.33■□□□□ 0.2
SPCS3P61009 SERP1-208ENST00000491660 830 ntTSL 2 BASIC16.33■□□□□ 0.2
SPCS3P61009 AL136967.2-201ENST00000623968 743 ntBASIC16.33■□□□□ 0.2
SPCS3P61009 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SPCS3P61009 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SPCS3P61009 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SPCS3P61009 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
SPCS3P61009 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SPCS3P61009 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC16.33■□□□□ 0.2
SPCS3P61009 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
SPCS3P61009 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SPCS3P61009 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
SPCS3P61009 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC16.33■□□□□ 0.2
SPCS3P61009 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SPCS3P61009 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SPCS3P61009 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SPCS3P61009 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SPCS3P61009 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.32■□□□□ 0.2
SPCS3P61009 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SPCS3P61009 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SPCS3P61009 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SPCS3P61009 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC16.32■□□□□ 0.2
SPCS3P61009 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC16.32■□□□□ 0.2
SPCS3P61009 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SPCS3P61009 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SPCS3P61009 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
SPCS3P61009 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SPCS3P61009 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC16.32■□□□□ 0.2
SPCS3P61009 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC16.32■□□□□ 0.2
SPCS3P61009 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SPCS3P61009 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SPCS3P61009 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC16.32■□□□□ 0.2
SPCS3P61009 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC16.32■□□□□ 0.2
SPCS3P61009 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC16.32■□□□□ 0.2
SPCS3P61009 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms