Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RAD23BP54727 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RAD23BP54727 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RAD23BP54727 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.56■■□□□ 1.04
RAD23BP54727 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.56■■□□□ 1.04
RAD23BP54727 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.55■■□□□ 1.04
RAD23BP54727 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
RAD23BP54727 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.55■■□□□ 1.04
RAD23BP54727 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
RAD23BP54727 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
RAD23BP54727 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RAD23BP54727 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.55■■□□□ 1.04
RAD23BP54727 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RAD23BP54727 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.55■■□□□ 1.04
RAD23BP54727 AC069152.1-201ENST00000438030 544 ntBASIC21.55■■□□□ 1.04
RAD23BP54727 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
RAD23BP54727 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.55■■□□□ 1.04
RAD23BP54727 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC21.55■■□□□ 1.04
RAD23BP54727 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.55■■□□□ 1.04
RAD23BP54727 MYC-209ENST00000641252 345 ntBASIC21.55■■□□□ 1.04
RAD23BP54727 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.55■■□□□ 1.04
RAD23BP54727 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.55■■□□□ 1.04
RAD23BP54727 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RAD23BP54727 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RAD23BP54727 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
RAD23BP54727 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.55■■□□□ 1.04
RAD23BP54727 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
RAD23BP54727 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RAD23BP54727 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
RAD23BP54727 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RAD23BP54727 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RAD23BP54727 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
RAD23BP54727 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
RAD23BP54727 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
RAD23BP54727 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.54■■□□□ 1.04
RAD23BP54727 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
RAD23BP54727 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
RAD23BP54727 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.54■■□□□ 1.04
RAD23BP54727 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
RAD23BP54727 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RAD23BP54727 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.54■■□□□ 1.04
RAD23BP54727 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.54■■□□□ 1.04
RAD23BP54727 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RAD23BP54727 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
RAD23BP54727 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RAD23BP54727 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
RAD23BP54727 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
RAD23BP54727 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RAD23BP54727 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.53■■□□□ 1.04
RAD23BP54727 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.53■■□□□ 1.04
RAD23BP54727 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.53■■□□□ 1.04
RAD23BP54727 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.53■■□□□ 1.04
RAD23BP54727 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RAD23BP54727 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.53■■□□□ 1.04
RAD23BP54727 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.53■■□□□ 1.04
RAD23BP54727 AC133041.1-202ENST00000642053 222 ntBASIC21.53■■□□□ 1.04
RAD23BP54727 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RAD23BP54727 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.53■■□□□ 1.04
RAD23BP54727 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
RAD23BP54727 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RAD23BP54727 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
RAD23BP54727 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.53■■□□□ 1.04
RAD23BP54727 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.52■■□□□ 1.04
RAD23BP54727 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RAD23BP54727 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RAD23BP54727 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RAD23BP54727 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.52■■□□□ 1.04
RAD23BP54727 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.52■■□□□ 1.04
RAD23BP54727 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.52■■□□□ 1.04
RAD23BP54727 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RAD23BP54727 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RAD23BP54727 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.52■■□□□ 1.04
RAD23BP54727 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RAD23BP54727 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RAD23BP54727 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
RAD23BP54727 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.52■■□□□ 1.04
RAD23BP54727 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RAD23BP54727 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.52■■□□□ 1.04
RAD23BP54727 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
RAD23BP54727 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RAD23BP54727 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
RAD23BP54727 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.03
RAD23BP54727 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.52■■□□□ 1.03
RAD23BP54727 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.51■■□□□ 1.03
RAD23BP54727 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RAD23BP54727 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RAD23BP54727 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.51■■□□□ 1.03
RAD23BP54727 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.51■■□□□ 1.03
RAD23BP54727 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
RAD23BP54727 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.51■■□□□ 1.03
RAD23BP54727 DPP3P2-201ENST00000416030 1696 ntBASIC21.51■■□□□ 1.03
RAD23BP54727 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RAD23BP54727 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.51■■□□□ 1.03
RAD23BP54727 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.51■■□□□ 1.03
RAD23BP54727 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.51■■□□□ 1.03
RAD23BP54727 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.51■■□□□ 1.03
RAD23BP54727 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
RAD23BP54727 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RAD23BP54727 AL512408.1-201ENST00000569378 2000 ntBASIC21.5■■□□□ 1.03
RAD23BP54727 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms