Protein–RNA interactions for Protein: P54253

ATXN1, Ataxin-1, humanhuman

Known RBP Predictions only

Length 815 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1P54253 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATXN1P54253 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.18■□□□□ 0.98
ATXN1P54253 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATXN1P54253 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ATXN1P54253 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATXN1P54253 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.18■□□□□ 0.98
ATXN1P54253 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC21.18■□□□□ 0.98
ATXN1P54253 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.18■□□□□ 0.98
ATXN1P54253 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.18■□□□□ 0.98
ATXN1P54253 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
ATXN1P54253 MME-217ENST00000616757 1315 ntTSL 5 BASIC21.18■□□□□ 0.98
ATXN1P54253 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATXN1P54253 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATXN1P54253 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.18■□□□□ 0.98
ATXN1P54253 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.18■□□□□ 0.98
ATXN1P54253 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATXN1P54253 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
ATXN1P54253 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ATXN1P54253 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ATXN1P54253 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
ATXN1P54253 AC020907.5-201ENST00000624372 1936 ntBASIC21.17■□□□□ 0.98
ATXN1P54253 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
ATXN1P54253 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATXN1P54253 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
ATXN1P54253 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATXN1P54253 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATXN1P54253 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATXN1P54253 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATXN1P54253 BX276092.2-201ENST00000417668 665 ntBASIC21.17■□□□□ 0.98
ATXN1P54253 UBE2SP1-201ENST00000450587 669 ntBASIC21.17■□□□□ 0.98
ATXN1P54253 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATXN1P54253 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.17■□□□□ 0.98
ATXN1P54253 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ATXN1P54253 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATXN1P54253 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
ATXN1P54253 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.17■□□□□ 0.98
ATXN1P54253 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
ATXN1P54253 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATXN1P54253 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATXN1P54253 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATXN1P54253 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATXN1P54253 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATXN1P54253 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.16■□□□□ 0.98
ATXN1P54253 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
ATXN1P54253 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATXN1P54253 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.16■□□□□ 0.98
ATXN1P54253 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC21.16■□□□□ 0.98
ATXN1P54253 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.16■□□□□ 0.98
ATXN1P54253 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ATXN1P54253 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.16■□□□□ 0.98
ATXN1P54253 RHOD-202ENST00000532559 538 ntTSL 3 BASIC21.16■□□□□ 0.98
ATXN1P54253 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC21.16■□□□□ 0.98
ATXN1P54253 AC105020.6-201ENST00000621523 1217 ntBASIC21.16■□□□□ 0.98
ATXN1P54253 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.16■□□□□ 0.98
ATXN1P54253 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATXN1P54253 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATXN1P54253 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.16■□□□□ 0.98
ATXN1P54253 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATXN1P54253 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATXN1P54253 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.15■□□□□ 0.98
ATXN1P54253 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ATXN1P54253 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.15■□□□□ 0.98
ATXN1P54253 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.15■□□□□ 0.98
ATXN1P54253 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.15■□□□□ 0.98
ATXN1P54253 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATXN1P54253 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
ATXN1P54253 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATXN1P54253 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATXN1P54253 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATXN1P54253 AC097658.1-201ENST00000475555 843 ntBASIC21.15■□□□□ 0.98
ATXN1P54253 KRT18P21-201ENST00000515767 1272 ntBASIC21.15■□□□□ 0.98
ATXN1P54253 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.15■□□□□ 0.98
ATXN1P54253 MIR4497-201ENST00000583208 89 ntBASIC21.15■□□□□ 0.98
ATXN1P54253 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ATXN1P54253 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.15■□□□□ 0.98
ATXN1P54253 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.15■□□□□ 0.98
ATXN1P54253 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ATXN1P54253 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATXN1P54253 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.15■□□□□ 0.98
ATXN1P54253 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ATXN1P54253 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATXN1P54253 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
ATXN1P54253 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ATXN1P54253 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
ATXN1P54253 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.14■□□□□ 0.98
ATXN1P54253 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.98
ATXN1P54253 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ATXN1P54253 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ATXN1P54253 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.14■□□□□ 0.98
ATXN1P54253 AL512408.1-201ENST00000569378 2000 ntBASIC21.14■□□□□ 0.98
ATXN1P54253 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.14■□□□□ 0.98
ATXN1P54253 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.98
ATXN1P54253 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
ATXN1P54253 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ATXN1P54253 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.14■□□□□ 0.97
ATXN1P54253 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
ATXN1P54253 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ATXN1P54253 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC21.14■□□□□ 0.97
ATXN1P54253 MYC-209ENST00000641252 345 ntBASIC21.14■□□□□ 0.97
ATXN1P54253 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms