Protein–RNA interactions for Protein: P54000

SUB1, RNA polymerase II transcriptional coactivator SUB1, yeastyeast

Known RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SUB1P54000 NUP188YML103C 4968 nt1.65□□□□□ -2.15
SUB1P54000 SEC3YER008C 4011 nt1.64□□□□□ -2.15
SUB1P54000 APL2YKL135C 2181 nt1.64□□□□□ -2.15
SUB1P54000 ATP19YOL077W-A 207 nt1.64□□□□□ -2.15
SUB1P54000 YLL032CYLL032C 2478 nt1.63□□□□□ -2.15
SUB1P54000 BRR2YER172C 6492 nt1.63□□□□□ -2.15
SUB1P54000 RVS161YCR009C 798 nt1.63□□□□□ -2.15
SUB1P54000 YIL059CYIL059C 366 nt1.63□□□□□ -2.15
SUB1P54000 CDC33YOL139C 642 nt1.63□□□□□ -2.15
SUB1P54000 YDR269CYDR269C 324 nt1.62□□□□□ -2.15
SUB1P54000 YLR422WYLR422W 5799 nt1.62□□□□□ -2.15
SUB1P54000 ALY2YJL084C 3141 nt1.62□□□□□ -2.15
SUB1P54000 RAD9YDR217C 3930 nt1.61□□□□□ -2.15
SUB1P54000 YBL071CYBL071C 309 nt1.61□□□□□ -2.15
SUB1P54000 YOR146WYOR146W 306 nt1.61□□□□□ -2.15
SUB1P54000 APL3YBL037W 3078 nt1.6□□□□□ -2.15
SUB1P54000 YLL020CYLL020C 306 nt1.6□□□□□ -2.15
SUB1P54000 YMR175W-AYMR175W-A 195 nt1.6□□□□□ -2.15
SUB1P54000 NUT2YPR168W 474 nt1.6□□□□□ -2.15
SUB1P54000 SPT21YMR179W 2277 nt1.6□□□□□ -2.15
SUB1P54000 NUP145YGL092W 3954 nt1.59□□□□□ -2.15
SUB1P54000 YDL011CYDL011C 324 nt1.59□□□□□ -2.15
SUB1P54000 YDR182W-AYDR182W-A 204 nt1.59□□□□□ -2.15
SUB1P54000 tQ(UUG)E2tQ(UUG)E2 72 nt1.59□□□□□ -2.15
SUB1P54000 RPS27AYKL156W 249 nt1.59□□□□□ -2.15
SUB1P54000 YLR101CYLR101C 396 nt1.59□□□□□ -2.15
SUB1P54000 FYV12YOR183W 390 nt1.59□□□□□ -2.15
SUB1P54000 DIE2YGR227W 1578 nt1.59□□□□□ -2.16
SUB1P54000 PIP2YOR363C 2991 nt1.59□□□□□ -2.16
SUB1P54000 SLY1YDR189W 2001 nt1.58□□□□□ -2.16
SUB1P54000 TIM13YGR181W 318 nt1.58□□□□□ -2.16
SUB1P54000 MRPL31YKL138C 396 nt1.58□□□□□ -2.16
SUB1P54000 YOL019W-AYOL019W-A 153 nt1.58□□□□□ -2.16
SUB1P54000 YER006C-AYER006C-A 318 nt1.57□□□□□ -2.16
SUB1P54000 YIL020C-AYIL020C-A 339 nt1.57□□□□□ -2.16
SUB1P54000 snR14snR14 160 nt1.57□□□□□ -2.16
SUB1P54000 YPP1YGR198W 2454 nt1.57□□□□□ -2.16
SUB1P54000 EAF1YDR359C 2949 nt1.56□□□□□ -2.16
SUB1P54000 SAS3YBL052C 2496 nt1.56□□□□□ -2.16
SUB1P54000 CDC36YDL165W 576 nt1.56□□□□□ -2.16
SUB1P54000 WIP1YDR374W-A 270 nt1.56□□□□□ -2.16
SUB1P54000 YHL037CYHL037C 402 nt1.56□□□□□ -2.16
SUB1P54000 YKL202WYKL202W 582 nt1.56□□□□□ -2.16
SUB1P54000 YLR287CYLR287C 1068 nt1.56□□□□□ -2.16
SUB1P54000 CCH1YGR217W 6120 nt1.55□□□□□ -2.16
SUB1P54000 STB6YKL072W 2301 nt1.55□□□□□ -2.16
SUB1P54000 RTT102YGR275W 474 nt1.55□□□□□ -2.16
SUB1P54000 UPS1YLR193C 528 nt1.55□□□□□ -2.16
SUB1P54000 YOR192C-CYOR192C-C 237 nt1.55□□□□□ -2.16
SUB1P54000 CDC39YCR093W 6327 nt1.55□□□□□ -2.16
SUB1P54000 PBY1YBR094W 2262 nt1.54□□□□□ -2.16
SUB1P54000 EFR3YMR212C 2349 nt1.54□□□□□ -2.16
SUB1P54000 TOM22YNL131W 459 nt1.54□□□□□ -2.16
SUB1P54000 YBR012CYBR012C 420 nt1.54□□□□□ -2.16
SUB1P54000 GAL7YBR018C 1101 nt1.54□□□□□ -2.16
SUB1P54000 MPT5YGL178W 2580 nt1.53□□□□□ -2.16
SUB1P54000 AI5_ALPHAQ0070 1893 nt1.53□□□□□ -2.16
SUB1P54000 TRM3YDL112W 4311 nt1.53□□□□□ -2.16
SUB1P54000 CYC7YEL039C 342 nt1.52□□□□□ -2.17
SUB1P54000 SDH2YLL041C 801 nt1.52□□□□□ -2.17
SUB1P54000 UBC7YMR022W 498 nt1.52□□□□□ -2.17
SUB1P54000 COA6YMR244C-A 315 nt1.52□□□□□ -2.17
SUB1P54000 CDC31YOR257W 486 nt1.52□□□□□ -2.17
SUB1P54000 snR41snR41 95 nt1.52□□□□□ -2.17
SUB1P54000 SCW11YGL028C 1629 nt1.51□□□□□ -2.17
SUB1P54000 YJL020W-AYJL020W-A 258 nt1.51□□□□□ -2.17
SUB1P54000 YOL159CYOL159C 516 nt1.51□□□□□ -2.17
SUB1P54000 MDS3YGL197W 4464 nt1.51□□□□□ -2.17
SUB1P54000 CBS1YDL069C 690 nt1.49□□□□□ -2.17
SUB1P54000 MRPL50YNR022C 420 nt1.49□□□□□ -2.17
SUB1P54000 YML003WYML003W 873 nt1.48□□□□□ -2.17
SUB1P54000 MAD1YGL086W 2250 nt1.48□□□□□ -2.17
SUB1P54000 AIM9YER080W 1884 nt1.48□□□□□ -2.17
SUB1P54000 RRT1YBL048W 312 nt1.47□□□□□ -2.17
SUB1P54000 Q0017Q0017 162 nt1.47□□□□□ -2.17
SUB1P54000 NUP157YER105C 4176 nt1.46□□□□□ -2.18
SUB1P54000 SET3YKR029C 2256 nt1.46□□□□□ -2.18
SUB1P54000 YDL032WYDL032W 312 nt1.46□□□□□ -2.18
SUB1P54000 YMR242W-AYMR242W-A 90 nt1.46□□□□□ -2.18
SUB1P54000 YOR108C-AYOR108C-A 210 nt1.46□□□□□ -2.18
SUB1P54000 AIM44YPL158C 2277 nt1.46□□□□□ -2.18
SUB1P54000 YIL102CYIL102C 306 nt1.45□□□□□ -2.18
SUB1P54000 PFD1YJL179W 330 nt1.45□□□□□ -2.18
SUB1P54000 NPC2YDL046W 522 nt1.44□□□□□ -2.18
SUB1P54000 YJL007CYJL007C 315 nt1.44□□□□□ -2.18
SUB1P54000 YPL229WYPL229W 621 nt1.44□□□□□ -2.18
SUB1P54000 CAT8YMR280C 4302 nt1.44□□□□□ -2.18
SUB1P54000 LCD1YDR499W 2244 nt1.44□□□□□ -2.18
SUB1P54000 ZIP2YGL249W 2115 nt1.43□□□□□ -2.18
SUB1P54000 AHC1YOR023C 1701 nt1.43□□□□□ -2.18
SUB1P54000 SDH7YDR511W 402 nt1.43□□□□□ -2.18
SUB1P54000 YPL261CYPL261C 309 nt1.43□□□□□ -2.18
SUB1P54000 YBR221W-AYBR221W-A 105 nt1.43□□□□□ -2.18
SUB1P54000 MMS4YBR098W 2076 nt1.43□□□□□ -2.18
SUB1P54000 SLI15YBR156C 2097 nt1.43□□□□□ -2.18
SUB1P54000 TMA10YLR327C 261 nt1.42□□□□□ -2.18
SUB1P54000 YLR456WYLR456W 615 nt1.42□□□□□ -2.18
SUB1P54000 PAN2YGL094C 3348 nt1.41□□□□□ -2.18
SUB1P54000 YMR141W-AYMR141W-A 225 nt1.41□□□□□ -2.18
SUB1P54000 PDE2YOR360C 1581 nt1.41□□□□□ -2.18
Retrieved 100 of 7,029 protein–RNA pairs in 53.2 ms