Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.72■□□□□ 0.59
RNF144AP50876 AC007322.4-201ENST00000509611 723 ntBASIC18.72■□□□□ 0.59
RNF144AP50876 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
RNF144AP50876 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.72■□□□□ 0.59
RNF144AP50876 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF144AP50876 AC005181.1-201ENST00000604782 1256 ntBASIC18.72■□□□□ 0.59
RNF144AP50876 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.72■□□□□ 0.59
RNF144AP50876 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RNF144AP50876 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF144AP50876 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNF144AP50876 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.71■□□□□ 0.59
RNF144AP50876 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF144AP50876 CYP21A1P-202ENST00000354927 1481 ntBASIC18.71■□□□□ 0.59
RNF144AP50876 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
RNF144AP50876 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
RNF144AP50876 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF144AP50876 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNF144AP50876 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNF144AP50876 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.71■□□□□ 0.59
RNF144AP50876 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
RNF144AP50876 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF144AP50876 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF144AP50876 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF144AP50876 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNF144AP50876 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.71■□□□□ 0.59
RNF144AP50876 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.71■□□□□ 0.59
RNF144AP50876 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF144AP50876 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
RNF144AP50876 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF144AP50876 MIR663A-201ENST00000385250 93 ntBASIC18.71■□□□□ 0.59
RNF144AP50876 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.71■□□□□ 0.59
RNF144AP50876 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.71■□□□□ 0.59
RNF144AP50876 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF144AP50876 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNF144AP50876 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF144AP50876 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF144AP50876 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.71■□□□□ 0.58
RNF144AP50876 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
RNF144AP50876 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF144AP50876 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RNF144AP50876 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF144AP50876 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
RNF144AP50876 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.7■□□□□ 0.58
RNF144AP50876 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF144AP50876 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
RNF144AP50876 RARRES2P4-201ENST00000514074 484 ntBASIC18.7■□□□□ 0.58
RNF144AP50876 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
RNF144AP50876 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.7■□□□□ 0.58
RNF144AP50876 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.7■□□□□ 0.58
RNF144AP50876 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.7■□□□□ 0.58
RNF144AP50876 FAM21FP-204ENST00000608637 956 ntBASIC18.7■□□□□ 0.58
RNF144AP50876 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
RNF144AP50876 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
RNF144AP50876 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RNF144AP50876 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF144AP50876 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.7■□□□□ 0.58
RNF144AP50876 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.7■□□□□ 0.58
RNF144AP50876 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF144AP50876 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF144AP50876 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.7■□□□□ 0.58
RNF144AP50876 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF144AP50876 DPP3P2-201ENST00000416030 1696 ntBASIC18.69■□□□□ 0.58
RNF144AP50876 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
RNF144AP50876 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF144AP50876 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF144AP50876 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RNF144AP50876 KRT8P36-201ENST00000489121 1440 ntBASIC18.69■□□□□ 0.58
RNF144AP50876 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RNF144AP50876 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF144AP50876 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.69■□□□□ 0.58
RNF144AP50876 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.69■□□□□ 0.58
RNF144AP50876 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF144AP50876 AL050303.2-201ENST00000619798 666 ntBASIC18.69■□□□□ 0.58
RNF144AP50876 AC231657.2-201ENST00000624556 255 ntBASIC18.69■□□□□ 0.58
RNF144AP50876 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
RNF144AP50876 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF144AP50876 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RNF144AP50876 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF144AP50876 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF144AP50876 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RNF144AP50876 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF144AP50876 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF144AP50876 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RNF144AP50876 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF144AP50876 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF144AP50876 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.68■□□□□ 0.58
RNF144AP50876 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RNF144AP50876 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF144AP50876 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.68■□□□□ 0.58
RNF144AP50876 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF144AP50876 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF144AP50876 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF144AP50876 AC099778.1-201ENST00000568593 1911 ntBASIC18.68■□□□□ 0.58
RNF144AP50876 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RNF144AP50876 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RNF144AP50876 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF144AP50876 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF144AP50876 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
RNF144AP50876 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF144AP50876 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms