Protein–RNA interactions for Protein: P47111

VPS55, Vacuolar protein sorting-associated protein 55, yeastyeast

Predictions only

Length 140 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS55P47111 YDR182W-AYDR182W-A 204 nt0.13□□□□□ -2.39
VPS55P47111 YHR139C-AYHR139C-A 312 nt0.13□□□□□ -2.39
VPS55P47111 VPS63YLR261C 327 nt0.13□□□□□ -2.39
VPS55P47111 ATG16YMR159C 453 nt0.13□□□□□ -2.39
VPS55P47111 YOR366WYOR366W 354 nt0.13□□□□□ -2.39
VPS55P47111 STE5YDR103W 2754 nt0.13□□□□□ -2.39
VPS55P47111 PPN1YDR452W 2025 nt0.13□□□□□ -2.39
VPS55P47111 15S_rRNA15S_rRNA 1649 nt0.13□□□□□ -2.39
VPS55P47111 HNT1YDL125C 477 nt0.12□□□□□ -2.39
VPS55P47111 RMD6YEL072W 696 nt0.12□□□□□ -2.39
VPS55P47111 YNL054W-BYNL054W-B 5250 nt0.12□□□□□ -2.39
VPS55P47111 WAR1YML076C 2835 nt0.12□□□□□ -2.39
VPS55P47111 ARV1YLR242C 966 nt0.11□□□□□ -2.39
VPS55P47111 SUS1YBR111W-A 291 nt0.11□□□□□ -2.39
VPS55P47111 ALY2YJL084C 3141 nt0.11□□□□□ -2.39
VPS55P47111 ISD11YER048W-A 285 nt0.1□□□□□ -2.39
VPS55P47111 SBH1YER087C-B 249 nt0.1□□□□□ -2.39
VPS55P47111 YIL134C-AYIL134C-A 204 nt0.1□□□□□ -2.39
VPS55P47111 GPX1YKL026C 504 nt0.1□□□□□ -2.39
VPS55P47111 ATP20YPR020W 348 nt0.1□□□□□ -2.39
VPS55P47111 THO2YNL139C 4794 nt0.1□□□□□ -2.39
VPS55P47111 RUB1YDR139C 234 nt0.09□□□□□ -2.4
VPS55P47111 RPL26BYGR034W 384 nt0.09□□□□□ -2.4
VPS55P47111 LOA1YPR139C 903 nt0.09□□□□□ -2.4
VPS55P47111 YPR153WYPR153W 423 nt0.09□□□□□ -2.4
VPS55P47111 MMS4YBR098W 2076 nt0.09□□□□□ -2.4
VPS55P47111 ENV11YGR071C 2583 nt0.08□□□□□ -2.4
VPS55P47111 YEL030C-AYEL030C-A 315 nt0.08□□□□□ -2.4
VPS55P47111 YER038W-AYER038W-A 381 nt0.08□□□□□ -2.4
VPS55P47111 YPL080CYPL080C 327 nt0.08□□□□□ -2.4
VPS55P47111 snR34snR34 203 nt0.08□□□□□ -2.4
VPS55P47111 YDL152WYDL152W 366 nt0.07□□□□□ -2.4
VPS55P47111 MET32YDR253C 576 nt0.07□□□□□ -2.4
VPS55P47111 RPL37AYLR185W 267 nt0.07□□□□□ -2.4
VPS55P47111 COX7YMR256C 183 nt0.07□□□□□ -2.4
VPS55P47111 PKH2YOL100W 3246 nt0.06□□□□□ -2.4
VPS55P47111 LCD1YDR499W 2244 nt0.06□□□□□ -2.4
VPS55P47111 NPR2YEL062W 1848 nt0.06□□□□□ -2.4
VPS55P47111 snR84snR84 550 nt0.06□□□□□ -2.4
VPS55P47111 RSM27YGR215W 333 nt0.06□□□□□ -2.4
VPS55P47111 DFG10YIL049W 762 nt0.06□□□□□ -2.4
VPS55P47111 SLY1YDR189W 2001 nt0.06□□□□□ -2.4
VPS55P47111 snR59snR59 78 nt0.05□□□□□ -2.4
VPS55P47111 YHR054CYHR054C 1065 nt0.05□□□□□ -2.4
VPS55P47111 GIM5YML094W 492 nt0.05□□□□□ -2.4
VPS55P47111 YOL013W-AYOL013W-A 192 nt0.05□□□□□ -2.4
VPS55P47111 RCN2YOR220W 798 nt0.05□□□□□ -2.4
VPS55P47111 NOP9YJL010C 2001 nt0.04□□□□□ -2.4
VPS55P47111 BUL2YML111W 2763 nt0.04□□□□□ -2.4
VPS55P47111 YOR192C-BYOR192C-B 5313 nt0.04□□□□□ -2.4
VPS55P47111 PMP1YCR024C-A 123 nt0.04□□□□□ -2.4
VPS55P47111 snR79snR79 84 nt0.04□□□□□ -2.4
VPS55P47111 QCR7YDR529C 384 nt0.04□□□□□ -2.4
VPS55P47111 YFR057WYFR057W 456 nt0.04□□□□□ -2.4
VPS55P47111 YOR282WYOR282W 321 nt0.04□□□□□ -2.4
VPS55P47111 YBR121C-AYBR121C-A 159 nt0.04□□□□□ -2.4
VPS55P47111 SPO23YBR250W 1572 nt0.03□□□□□ -2.4
VPS55P47111 IRC2YDR112W 309 nt0.03□□□□□ -2.4
VPS55P47111 YDR114CYDR114C 303 nt0.03□□□□□ -2.4
VPS55P47111 CMS1YLR003C 876 nt0.03□□□□□ -2.4
VPS55P47111 UPS1YLR193C 528 nt0.03□□□□□ -2.4
VPS55P47111 YMR158C-AYMR158C-A 138 nt0.03□□□□□ -2.4
VPS55P47111 snR13snR13 124 nt0.03□□□□□ -2.4
VPS55P47111 AFR1YDR085C 1863 nt0.03□□□□□ -2.41
VPS55P47111 RPL22BYFL034C-A 369 nt0.02□□□□□ -2.41
VPS55P47111 RPS30AYLR287C-A 192 nt0.02□□□□□ -2.41
VPS55P47111 TYE7YOR344C 876 nt0.02□□□□□ -2.41
VPS55P47111 YDR008CYDR008C 351 nt0.01□□□□□ -2.41
VPS55P47111 DAD1YDR016C 285 nt0.01□□□□□ -2.41
VPS55P47111 YDR344CYDR344C 444 nt0.01□□□□□ -2.41
VPS55P47111 YHR050W-AYHR050W-A 171 nt0.01□□□□□ -2.41
VPS55P47111 RRT1YBL048W 312 nt0.01□□□□□ -2.41
VPS55P47111 COX12YLR038C 252 nt0□□□□□ -2.41
VPS55P47111 YOR108C-AYOR108C-A 210 nt0□□□□□ -2.41
VPS55P47111 PRP5YBR237W 2550 nt0□□□□□ -2.41
VPS55P47111 SEC8YPR055W 3198 nt-0□□□□□ -2.41
VPS55P47111 RPL9AYGL147C 576 nt-0.01□□□□□ -2.41
VPS55P47111 ACF4YJR083C 930 nt-0.01□□□□□ -2.41
VPS55P47111 YMR304C-AYMR304C-A 351 nt-0.01□□□□□ -2.41
VPS55P47111 YPL119C-AYPL119C-A 264 nt-0.01□□□□□ -2.41
VPS55P47111 VMA21YGR105W 234 nt-0.02□□□□□ -2.41
VPS55P47111 YMR153C-AYMR153C-A 336 nt-0.02□□□□□ -2.41
VPS55P47111 YOR053WYOR053W 342 nt-0.02□□□□□ -2.41
VPS55P47111 YPR099CYPR099C 357 nt-0.02□□□□□ -2.41
VPS55P47111 snR45snR45 172 nt-0.02□□□□□ -2.41
VPS55P47111 MLP2YIL149C 5040 nt-0.02□□□□□ -2.41
VPS55P47111 PET111YMR257C 2403 nt-0.03□□□□□ -2.41
VPS55P47111 SPO11YHL022C 1197 nt-0.03□□□□□ -2.41
VPS55P47111 tT(UGU)Q1tT(UGU)Q1 76 nt-0.03□□□□□ -2.41
VPS55P47111 YJR140W-AYJR140W-A 150 nt-0.03□□□□□ -2.41
VPS55P47111 YLR252WYLR252W 306 nt-0.03□□□□□ -2.41
VPS55P47111 RPL32YBL092W 393 nt-0.03□□□□□ -2.41
VPS55P47111 SVS1YPL163C 783 nt-0.03□□□□□ -2.41
VPS55P47111 PAN3YKL025C 2040 nt-0.03□□□□□ -2.41
VPS55P47111 ASE1YOR058C 2658 nt-0.04□□□□□ -2.42
VPS55P47111 SRB7YDR308C 423 nt-0.04□□□□□ -2.42
VPS55P47111 YER158W-AYER158W-A 216 nt-0.04□□□□□ -2.42
VPS55P47111 YHL042WYHL042W 453 nt-0.04□□□□□ -2.42
VPS55P47111 LRP1YHR081W 555 nt-0.04□□□□□ -2.42
VPS55P47111 BIG1YHR101C 1008 nt-0.04□□□□□ -2.42
Retrieved 100 of 7,029 protein–RNA pairs in 24.6 ms