Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AL022342.1-201ENST00000400363 863 ntBASIC26.77■■□□□ 1.88
RXRBP28702 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
RXRBP28702 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC26.77■■□□□ 1.88
RXRBP28702 AL359075.1-203ENST00000462729 1002 ntBASIC26.77■■□□□ 1.88
RXRBP28702 AC141257.4-201ENST00000634557 245 ntBASIC26.77■■□□□ 1.88
RXRBP28702 AC136944.6-201ENST00000634818 245 ntBASIC26.77■■□□□ 1.88
RXRBP28702 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
RXRBP28702 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
RXRBP28702 NARF-205ENST00000412079 1760 ntTSL 5 BASIC26.76■■□□□ 1.88
RXRBP28702 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC26.76■■□□□ 1.87
RXRBP28702 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC26.76■■□□□ 1.87
RXRBP28702 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
RXRBP28702 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
RXRBP28702 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC26.76■■□□□ 1.87
RXRBP28702 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC26.76■■□□□ 1.87
RXRBP28702 ATP5G2P1-201ENST00000433580 426 ntBASIC26.76■■□□□ 1.87
RXRBP28702 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC26.76■■□□□ 1.87
RXRBP28702 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
RXRBP28702 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC26.76■■□□□ 1.87
RXRBP28702 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
RXRBP28702 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.87
RXRBP28702 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
RXRBP28702 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC26.76■■□□□ 1.87
RXRBP28702 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
RXRBP28702 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC26.75■■□□□ 1.87
RXRBP28702 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
RXRBP28702 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC26.75■■□□□ 1.87
RXRBP28702 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC26.75■■□□□ 1.87
RXRBP28702 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC26.75■■□□□ 1.87
RXRBP28702 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC26.75■■□□□ 1.87
RXRBP28702 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC26.75■■□□□ 1.87
RXRBP28702 ANKRD20A18P-201ENST00000359341 492 ntBASIC26.75■■□□□ 1.87
RXRBP28702 HIST1H2APS4-201ENST00000362070 348 ntBASIC26.75■■□□□ 1.87
RXRBP28702 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC26.75■■□□□ 1.87
RXRBP28702 AC023632.3-201ENST00000521633 145 ntBASIC26.75■■□□□ 1.87
RXRBP28702 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
RXRBP28702 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC26.75■■□□□ 1.87
RXRBP28702 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
RXRBP28702 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC26.75■■□□□ 1.87
RXRBP28702 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC26.75■■□□□ 1.87
RXRBP28702 ABBA01031674.1-201ENST00000635145 728 ntBASIC26.75■■□□□ 1.87
RXRBP28702 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC26.75■■□□□ 1.87
RXRBP28702 AL031432.5-201ENST00000641059 760 ntBASIC26.75■■□□□ 1.87
RXRBP28702 AC116562.4-202ENST00000641738 218 ntBASIC26.75■■□□□ 1.87
RXRBP28702 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC26.75■■□□□ 1.87
RXRBP28702 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC26.74■■□□□ 1.87
RXRBP28702 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
RXRBP28702 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC26.74■■□□□ 1.87
RXRBP28702 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC26.74■■□□□ 1.87
RXRBP28702 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC26.74■■□□□ 1.87
RXRBP28702 AC011506.1-201ENST00000474329 610 ntBASIC26.74■■□□□ 1.87
RXRBP28702 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC26.74■■□□□ 1.87
RXRBP28702 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
RXRBP28702 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
RXRBP28702 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC26.74■■□□□ 1.87
RXRBP28702 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
RXRBP28702 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC26.73■■□□□ 1.87
RXRBP28702 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
RXRBP28702 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC26.73■■□□□ 1.87
RXRBP28702 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
RXRBP28702 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC26.73■■□□□ 1.87
RXRBP28702 VENTXP5-201ENST00000523979 775 ntBASIC26.73■■□□□ 1.87
RXRBP28702 PRR29-207ENST00000580752 458 ntTSL 3 BASIC26.73■■□□□ 1.87
RXRBP28702 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC26.73■■□□□ 1.87
RXRBP28702 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC26.73■■□□□ 1.87
RXRBP28702 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC26.73■■□□□ 1.87
RXRBP28702 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
RXRBP28702 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
RXRBP28702 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
RXRBP28702 STX5-203ENST00000394690 1568 ntTSL 5 BASIC26.72■■□□□ 1.87
RXRBP28702 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
RXRBP28702 FAAHP1-202ENST00000446499 1238 ntBASIC26.72■■□□□ 1.87
RXRBP28702 FDX2-206ENST00000492239 773 ntTSL 2 BASIC26.72■■□□□ 1.87
RXRBP28702 AL136038.3-201ENST00000561909 1096 ntBASIC26.72■■□□□ 1.87
RXRBP28702 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC26.72■■□□□ 1.87
RXRBP28702 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC26.72■■□□□ 1.87
RXRBP28702 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC26.72■■□□□ 1.87
RXRBP28702 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
RXRBP28702 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
RXRBP28702 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
RXRBP28702 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
RXRBP28702 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
RXRBP28702 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
RXRBP28702 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC26.71■■□□□ 1.87
RXRBP28702 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC26.71■■□□□ 1.87
RXRBP28702 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
RXRBP28702 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC26.71■■□□□ 1.87
RXRBP28702 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
RXRBP28702 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
RXRBP28702 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC26.71■■□□□ 1.87
RXRBP28702 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC26.71■■□□□ 1.87
RXRBP28702 AC111152.3-201ENST00000569699 673 ntBASIC26.71■■□□□ 1.87
RXRBP28702 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC26.71■■□□□ 1.87
RXRBP28702 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
RXRBP28702 AC139530.3-201ENST00000620344 690 ntBASIC26.71■■□□□ 1.87
RXRBP28702 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC26.71■■□□□ 1.87
RXRBP28702 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
RXRBP28702 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
RXRBP28702 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC26.71■■□□□ 1.87
RXRBP28702 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms