Protein–RNA interactions for Protein: P22516

CHL1, ATP-dependent DNA helicase CHL1, yeastyeast

Predicted RBP Predictions only

Length 861 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CHL1P22516 GSC2YGR032W 5688 nt3.53□□□□□ -1.84
CHL1P22516 SWI5YDR146C 2130 nt3.53□□□□□ -1.84
CHL1P22516 FUN30YAL019W 3396 nt3.52□□□□□ -1.85
CHL1P22516 YPL150WYPL150W 2706 nt3.52□□□□□ -1.85
CHL1P22516 YDR210WYDR210W 228 nt3.52□□□□□ -1.85
CHL1P22516 YGR051CYGR051C 324 nt3.52□□□□□ -1.85
CHL1P22516 YKL225WYKL225W 348 nt3.52□□□□□ -1.85
CHL1P22516 IFH1YLR223C 3258 nt3.52□□□□□ -1.85
CHL1P22516 INP53YOR109W 3324 nt3.52□□□□□ -1.85
CHL1P22516 SPT6YGR116W 4356 nt3.51□□□□□ -1.85
CHL1P22516 APL2YKL135C 2181 nt3.51□□□□□ -1.85
CHL1P22516 UBP11YKR098C 2154 nt3.51□□□□□ -1.85
CHL1P22516 PAU10YDR542W 363 nt3.51□□□□□ -1.85
CHL1P22516 PAU11YGL261C 363 nt3.51□□□□□ -1.85
CHL1P22516 SPT4YGR063C 309 nt3.51□□□□□ -1.85
CHL1P22516 PAU4YLR461W 363 nt3.51□□□□□ -1.85
CHL1P22516 MLH1YMR167W 2310 nt3.51□□□□□ -1.85
CHL1P22516 HFM1YGL251C 3564 nt3.51□□□□□ -1.85
CHL1P22516 CPA2YJR109C 3357 nt3.51□□□□□ -1.85
CHL1P22516 RAD26YJR035W 3258 nt3.5□□□□□ -1.85
CHL1P22516 NUP159YIL115C 4383 nt3.5□□□□□ -1.85
CHL1P22516 YLR232WYLR232W 348 nt3.5□□□□□ -1.85
CHL1P22516 YPP1YGR198W 2454 nt3.5□□□□□ -1.85
CHL1P22516 ZDS2YML109W 2829 nt3.49□□□□□ -1.85
CHL1P22516 YDL159W-AYDL159W-A 132 nt3.49□□□□□ -1.85
CHL1P22516 ITC1YGL133W 3795 nt3.49□□□□□ -1.85
CHL1P22516 KAP95YLR347C 2586 nt3.49□□□□□ -1.85
CHL1P22516 RAD2YGR258C 3096 nt3.48□□□□□ -1.85
CHL1P22516 PSK2YOL045W 3306 nt3.48□□□□□ -1.85
CHL1P22516 PRP22YER013W 3438 nt3.48□□□□□ -1.85
CHL1P22516 tC(GCA)BtC(GCA)B 72 nt3.48□□□□□ -1.85
CHL1P22516 tC(GCA)GtC(GCA)G 72 nt3.48□□□□□ -1.85
CHL1P22516 tC(GCA)P1tC(GCA)P1 72 nt3.48□□□□□ -1.85
CHL1P22516 tC(GCA)P2tC(GCA)P2 72 nt3.48□□□□□ -1.85
CHL1P22516 NAM7YMR080C 2916 nt3.48□□□□□ -1.85
CHL1P22516 AKR1YDR264C 2295 nt3.47□□□□□ -1.85
CHL1P22516 YJL127W-AYJL127W-A 117 nt3.47□□□□□ -1.85
CHL1P22516 XRN1YGL173C 4587 nt3.46□□□□□ -1.85
CHL1P22516 APE2YKL157W 2859 nt3.46□□□□□ -1.85
CHL1P22516 SNT1YCR033W 3681 nt3.46□□□□□ -1.86
CHL1P22516 YDR464C-AYDR464C-A 189 nt3.46□□□□□ -1.86
CHL1P22516 MET10YFR030W 3108 nt3.46□□□□□ -1.86
CHL1P22516 ANB1YJR047C 474 nt3.45□□□□□ -1.86
CHL1P22516 MYO3YKL129C 3819 nt3.45□□□□□ -1.86
CHL1P22516 YLR041WYLR041W 321 nt3.45□□□□□ -1.86
CHL1P22516 MAK21YDR060W 3078 nt3.45□□□□□ -1.86
CHL1P22516 ORC1YML065W 2745 nt3.44□□□□□ -1.86
CHL1P22516 MTR4YJL050W 3222 nt3.44□□□□□ -1.86
CHL1P22516 NPR3YHL023C 3441 nt3.44□□□□□ -1.86
CHL1P22516 YMR242W-AYMR242W-A 90 nt3.44□□□□□ -1.86
CHL1P22516 YBR196C-AYBR196C-A 150 nt3.44□□□□□ -1.86
CHL1P22516 TMA108YIL137C 2841 nt3.44□□□□□ -1.86
CHL1P22516 HEF3YNL014W 3135 nt3.42□□□□□ -1.86
CHL1P22516 ATG11YPR049C 3537 nt3.42□□□□□ -1.86
CHL1P22516 DNL4YOR005C 2835 nt3.42□□□□□ -1.86
CHL1P22516 SNC1YAL030W 354 nt3.42□□□□□ -1.86
CHL1P22516 OSH3YHR073W 2991 nt3.42□□□□□ -1.86
CHL1P22516 ALK1YGL021W 2283 nt3.41□□□□□ -1.86
CHL1P22516 ALA1YOR335C 2877 nt3.41□□□□□ -1.86
CHL1P22516 TAH1YCR060W 336 nt3.41□□□□□ -1.86
CHL1P22516 TOP1YOL006C 2310 nt3.41□□□□□ -1.86
CHL1P22516 RGA2YDR379W 3030 nt3.4□□□□□ -1.86
CHL1P22516 YMR122W-AYMR122W-A 255 nt3.4□□□□□ -1.87
CHL1P22516 SRO77YBL106C 3033 nt3.4□□□□□ -1.87
CHL1P22516 PTP2YOR208W 2253 nt3.39□□□□□ -1.87
CHL1P22516 NEW1YPL226W 3591 nt3.39□□□□□ -1.87
CHL1P22516 EAF1YDR359C 2949 nt3.38□□□□□ -1.87
CHL1P22516 PNC1YGL037C 651 nt3.38□□□□□ -1.87
CHL1P22516 CRS5YOR031W 210 nt3.38□□□□□ -1.87
CHL1P22516 BRE1YDL074C 2103 nt3.38□□□□□ -1.87
CHL1P22516 INP52YNL106C 3552 nt3.38□□□□□ -1.87
CHL1P22516 STU1YBL034C 4542 nt3.38□□□□□ -1.87
CHL1P22516 tK(UUU)DtK(UUU)D 73 nt3.37□□□□□ -1.87
CHL1P22516 tK(UUU)G1tK(UUU)G1 73 nt3.37□□□□□ -1.87
CHL1P22516 tK(UUU)G2tK(UUU)G2 73 nt3.37□□□□□ -1.87
CHL1P22516 tK(UUU)KtK(UUU)K 73 nt3.37□□□□□ -1.87
CHL1P22516 tK(UUU)LtK(UUU)L 73 nt3.37□□□□□ -1.87
CHL1P22516 tK(UUU)OtK(UUU)O 73 nt3.37□□□□□ -1.87
CHL1P22516 tK(UUU)PtK(UUU)P 73 nt3.37□□□□□ -1.87
CHL1P22516 NOP10YHR072W-A 177 nt3.37□□□□□ -1.87
CHL1P22516 IRR1YIL026C 3453 nt3.36□□□□□ -1.87
CHL1P22516 TRS120YDR407C 3870 nt3.36□□□□□ -1.87
CHL1P22516 YME2YMR302C 2553 nt3.36□□□□□ -1.87
CHL1P22516 YAL064W-BYAL064W-B 381 nt3.35□□□□□ -1.87
CHL1P22516 PAU8YAL068C 363 nt3.35□□□□□ -1.87
CHL1P22516 PAU18YLL064C 363 nt3.35□□□□□ -1.87
CHL1P22516 PAU6YNR076W 363 nt3.35□□□□□ -1.87
CHL1P22516 PAU20YOL161C 363 nt3.35□□□□□ -1.87
CHL1P22516 DGR2YKL121W 2559 nt3.35□□□□□ -1.87
CHL1P22516 RAD5YLR032W 3510 nt3.34□□□□□ -1.87
CHL1P22516 YTA7YGR270W 4140 nt3.34□□□□□ -1.88
CHL1P22516 DUG2YBR281C 2637 nt3.34□□□□□ -1.88
CHL1P22516 YDR034C-DYDR034C-D 5313 nt3.34□□□□□ -1.88
CHL1P22516 CHS3YBR023C 3498 nt3.34□□□□□ -1.88
CHL1P22516 PHO81YGR233C 3537 nt3.33□□□□□ -1.88
CHL1P22516 snR76snR76 109 nt3.33□□□□□ -1.88
CHL1P22516 URA2YJL130C 6645 nt3.33□□□□□ -1.88
CHL1P22516 CHS2YBR038W 2892 nt3.33□□□□□ -1.88
CHL1P22516 MDN1YLR106C 14733 nt3.33□□□□□ -1.88
CHL1P22516 YLR035C-AYLR035C-A 3468 nt3.32□□□□□ -1.88
Retrieved 100 of 7,029 protein–RNA pairs in 80.8 ms