Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC16.66■□□□□ 0.26
CCL3L1P16619 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCL3L1P16619 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC16.65■□□□□ 0.26
CCL3L1P16619 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCL3L1P16619 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCL3L1P16619 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CCL3L1P16619 SMG8-203ENST00000578922 2178 ntBASIC16.65■□□□□ 0.26
CCL3L1P16619 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCL3L1P16619 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCL3L1P16619 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCL3L1P16619 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCL3L1P16619 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCL3L1P16619 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CCL3L1P16619 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC16.65■□□□□ 0.26
CCL3L1P16619 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC16.65■□□□□ 0.26
CCL3L1P16619 AC091874.3-201ENST00000512672 1195 ntBASIC16.65■□□□□ 0.26
CCL3L1P16619 C2orf69P4-201ENST00000565394 541 ntBASIC16.65■□□□□ 0.26
CCL3L1P16619 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC16.65■□□□□ 0.26
CCL3L1P16619 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC16.65■□□□□ 0.26
CCL3L1P16619 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCL3L1P16619 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC16.65■□□□□ 0.26
CCL3L1P16619 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC16.65■□□□□ 0.26
CCL3L1P16619 NXN-202ENST00000537628 1340 ntTSL 3 BASIC16.65■□□□□ 0.26
CCL3L1P16619 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC16.65■□□□□ 0.26
CCL3L1P16619 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCL3L1P16619 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCL3L1P16619 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CCL3L1P16619 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CCL3L1P16619 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
CCL3L1P16619 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC16.64■□□□□ 0.26
CCL3L1P16619 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCL3L1P16619 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC16.64■□□□□ 0.25
CCL3L1P16619 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CCL3L1P16619 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
CCL3L1P16619 AC069152.1-201ENST00000438030 544 ntBASIC16.64■□□□□ 0.25
CCL3L1P16619 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC16.64■□□□□ 0.25
CCL3L1P16619 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC16.64■□□□□ 0.25
CCL3L1P16619 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC16.64■□□□□ 0.25
CCL3L1P16619 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCL3L1P16619 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCL3L1P16619 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC16.64■□□□□ 0.25
CCL3L1P16619 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCL3L1P16619 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCL3L1P16619 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCL3L1P16619 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCL3L1P16619 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CCL3L1P16619 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCL3L1P16619 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC16.63■□□□□ 0.25
CCL3L1P16619 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CCL3L1P16619 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCL3L1P16619 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCL3L1P16619 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCL3L1P16619 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCL3L1P16619 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC16.63■□□□□ 0.25
CCL3L1P16619 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCL3L1P16619 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCL3L1P16619 AC133041.1-202ENST00000642053 222 ntBASIC16.63■□□□□ 0.25
CCL3L1P16619 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC16.63■□□□□ 0.25
CCL3L1P16619 AL512408.1-201ENST00000569378 2000 ntBASIC16.63■□□□□ 0.25
CCL3L1P16619 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCL3L1P16619 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC16.63■□□□□ 0.25
CCL3L1P16619 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCL3L1P16619 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCL3L1P16619 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCL3L1P16619 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC16.63■□□□□ 0.25
CCL3L1P16619 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCL3L1P16619 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC16.62■□□□□ 0.25
CCL3L1P16619 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC16.62■□□□□ 0.25
CCL3L1P16619 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCL3L1P16619 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCL3L1P16619 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CCL3L1P16619 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC16.62■□□□□ 0.25
CCL3L1P16619 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CCL3L1P16619 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC16.62■□□□□ 0.25
CCL3L1P16619 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC16.62■□□□□ 0.25
CCL3L1P16619 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCL3L1P16619 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCL3L1P16619 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CCL3L1P16619 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CCL3L1P16619 APTR-205ENST00000447009 902 ntTSL 2 BASIC16.62■□□□□ 0.25
CCL3L1P16619 NME6-213ENST00000451657 871 ntTSL 2 BASIC16.62■□□□□ 0.25
CCL3L1P16619 RHEB-204ENST00000472642 900 ntTSL 3 BASIC16.62■□□□□ 0.25
CCL3L1P16619 AC097658.1-201ENST00000475555 843 ntBASIC16.62■□□□□ 0.25
CCL3L1P16619 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC16.62■□□□□ 0.25
CCL3L1P16619 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC16.62■□□□□ 0.25
CCL3L1P16619 EMC9-206ENST00000560403 872 ntTSL 2 BASIC16.62■□□□□ 0.25
CCL3L1P16619 BRWD1-AS2-201ENST00000603064 1028 ntBASIC16.62■□□□□ 0.25
CCL3L1P16619 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCL3L1P16619 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CCL3L1P16619 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CCL3L1P16619 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCL3L1P16619 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC16.62■□□□□ 0.25
CCL3L1P16619 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCL3L1P16619 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCL3L1P16619 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCL3L1P16619 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CCL3L1P16619 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
CCL3L1P16619 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCL3L1P16619 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC16.61■□□□□ 0.25
CCL3L1P16619 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms