Protein–RNA interactions for Protein: P0CX60

TY1A-PR2, Transposon Ty1-PR2 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-PR2P0CX60 DGR2YKL121W 2559 nt3.22□□□□□ -1.89
TY1A-PR2P0CX60 DCP2YNL118C 2913 nt3.22□□□□□ -1.89
TY1A-PR2P0CX60 RPA135YPR010C 3612 nt3.21□□□□□ -1.89
TY1A-PR2P0CX60 GCV2YMR189W 3105 nt3.21□□□□□ -1.9
TY1A-PR2P0CX60 DAN4YJR151C 3486 nt3.21□□□□□ -1.9
TY1A-PR2P0CX60 TRS120YDR407C 3870 nt3.21□□□□□ -1.9
TY1A-PR2P0CX60 YMR317WYMR317W 3423 nt3.21□□□□□ -1.9
TY1A-PR2P0CX60 VTC3YPL019C 2508 nt3.2□□□□□ -1.9
TY1A-PR2P0CX60 DUG2YBR281C 2637 nt3.2□□□□□ -1.9
TY1A-PR2P0CX60 ENA5YDR038C 3276 nt3.2□□□□□ -1.9
TY1A-PR2P0CX60 ENA2YDR039C 3276 nt3.2□□□□□ -1.9
TY1A-PR2P0CX60 ENA1YDR040C 3276 nt3.2□□□□□ -1.9
TY1A-PR2P0CX60 SKP2YNL311C 2292 nt3.2□□□□□ -1.9
TY1A-PR2P0CX60 ANB1YJR047C 474 nt3.2□□□□□ -1.9
TY1A-PR2P0CX60 KTI11YBL071W-A 249 nt3.2□□□□□ -1.9
TY1A-PR2P0CX60 MMS22YLR320W 4365 nt3.2□□□□□ -1.9
TY1A-PR2P0CX60 VPS16YPL045W 2397 nt3.2□□□□□ -1.9
TY1A-PR2P0CX60 SPO22YIL073C 2928 nt3.2□□□□□ -1.9
TY1A-PR2P0CX60 YCR102W-AYCR102W-A 198 nt3.19□□□□□ -1.9
TY1A-PR2P0CX60 tV(CAC)DtV(CAC)D 73 nt3.19□□□□□ -1.9
TY1A-PR2P0CX60 tV(CAC)HtV(CAC)H 73 nt3.19□□□□□ -1.9
TY1A-PR2P0CX60 SNC1YAL030W 354 nt3.19□□□□□ -1.9
TY1A-PR2P0CX60 SMC3YJL074C 3693 nt3.19□□□□□ -1.9
TY1A-PR2P0CX60 GLC3YEL011W 2115 nt3.19□□□□□ -1.9
TY1A-PR2P0CX60 CAT2YML042W 2013 nt3.19□□□□□ -1.9
TY1A-PR2P0CX60 YDR034C-AYDR034C-A 177 nt3.18□□□□□ -1.9
TY1A-PR2P0CX60 SPA2YLL021W 4401 nt3.18□□□□□ -1.9
TY1A-PR2P0CX60 IFH1YLR223C 3258 nt3.18□□□□□ -1.9
TY1A-PR2P0CX60 SAP190YKR028W 3102 nt3.17□□□□□ -1.9
TY1A-PR2P0CX60 YPP1YGR198W 2454 nt3.17□□□□□ -1.9
TY1A-PR2P0CX60 YIL156W-BYIL156W-B 222 nt3.17□□□□□ -1.9
TY1A-PR2P0CX60 YLL020CYLL020C 306 nt3.17□□□□□ -1.9
TY1A-PR2P0CX60 MET6YER091C 2304 nt3.17□□□□□ -1.9
TY1A-PR2P0CX60 PSK1YAL017W 4071 nt3.17□□□□□ -1.9
TY1A-PR2P0CX60 HMI1YOL095C 2121 nt3.16□□□□□ -1.9
TY1A-PR2P0CX60 VMR1YHL035C 4779 nt3.16□□□□□ -1.9
TY1A-PR2P0CX60 RPS22AYJL190C 393 nt3.16□□□□□ -1.9
TY1A-PR2P0CX60 YBR225WYBR225W 2703 nt3.15□□□□□ -1.9
TY1A-PR2P0CX60 MGM1YOR211C 2646 nt3.15□□□□□ -1.9
TY1A-PR2P0CX60 YJL026C-AYJL026C-A 222 nt3.15□□□□□ -1.91
TY1A-PR2P0CX60 APL1YJR005W 2103 nt3.15□□□□□ -1.91
TY1A-PR2P0CX60 TAF2YCR042C 4224 nt3.15□□□□□ -1.91
TY1A-PR2P0CX60 PKH1YDR490C 2301 nt3.14□□□□□ -1.91
TY1A-PR2P0CX60 PDR12YPL058C 4536 nt3.14□□□□□ -1.91
TY1A-PR2P0CX60 DSE4YNR067C 3354 nt3.14□□□□□ -1.91
TY1A-PR2P0CX60 TFC1YBR123C 1950 nt3.14□□□□□ -1.91
TY1A-PR2P0CX60 PHO91YNR013C 2685 nt3.13□□□□□ -1.91
TY1A-PR2P0CX60 ACB1YGR037C 264 nt3.13□□□□□ -1.91
TY1A-PR2P0CX60 tR(ACG)JtR(ACG)J 73 nt3.13□□□□□ -1.91
TY1A-PR2P0CX60 YAL064W-BYAL064W-B 381 nt3.13□□□□□ -1.91
TY1A-PR2P0CX60 snR39BsnR39B 96 nt3.13□□□□□ -1.91
TY1A-PR2P0CX60 LHS1YKL073W 2646 nt3.13□□□□□ -1.91
TY1A-PR2P0CX60 YEL025CYEL025C 3567 nt3.12□□□□□ -1.91
TY1A-PR2P0CX60 SWR1YDR334W 4545 nt3.12□□□□□ -1.91
TY1A-PR2P0CX60 NOP14YDL148C 2433 nt3.12□□□□□ -1.91
TY1A-PR2P0CX60 YPL150WYPL150W 2706 nt3.12□□□□□ -1.91
TY1A-PR2P0CX60 KIN2YLR096W 3444 nt3.11□□□□□ -1.91
TY1A-PR2P0CX60 FLO9YAL063C 3969 nt3.11□□□□□ -1.91
TY1A-PR2P0CX60 STB6YKL072W 2301 nt3.11□□□□□ -1.91
TY1A-PR2P0CX60 APL2YKL135C 2181 nt3.1□□□□□ -1.91
TY1A-PR2P0CX60 SDC25YLL016W 3147 nt3.1□□□□□ -1.91
TY1A-PR2P0CX60 RGR1YLR071C 3249 nt3.1□□□□□ -1.91
TY1A-PR2P0CX60 ALK1YGL021W 2283 nt3.09□□□□□ -1.91
TY1A-PR2P0CX60 RSF2YJR127C 4143 nt3.09□□□□□ -1.91
TY1A-PR2P0CX60 tM(CAU)Q2tM(CAU)Q2 78 nt3.09□□□□□ -1.91
TY1A-PR2P0CX60 RPS21AYKR057W 264 nt3.09□□□□□ -1.91
TY1A-PR2P0CX60 YOL083C-AYOL083C-A 141 nt3.09□□□□□ -1.91
TY1A-PR2P0CX60 ROM1YGR070W 3468 nt3.09□□□□□ -1.91
TY1A-PR2P0CX60 MMS1YPR164W 4224 nt3.09□□□□□ -1.92
TY1A-PR2P0CX60 YGR067CYGR067C 2415 nt3.09□□□□□ -1.92
TY1A-PR2P0CX60 CDC53YDL132W 2448 nt3.08□□□□□ -1.92
TY1A-PR2P0CX60 YDR521WYDR521W 336 nt3.08□□□□□ -1.92
TY1A-PR2P0CX60 YBL100W-CYBL100W-C 120 nt3.08□□□□□ -1.92
TY1A-PR2P0CX60 YBR072C-AYBR072C-A 162 nt3.08□□□□□ -1.92
TY1A-PR2P0CX60 ATG26YLR189C 3597 nt3.08□□□□□ -1.92
TY1A-PR2P0CX60 NEW1YPL226W 3591 nt3.08□□□□□ -1.92
TY1A-PR2P0CX60 MLH1YMR167W 2310 nt3.08□□□□□ -1.92
TY1A-PR2P0CX60 SQS1YNL224C 2304 nt3.08□□□□□ -1.92
TY1A-PR2P0CX60 YBL039C-AYBL039C-A 84 nt3.07□□□□□ -1.92
TY1A-PR2P0CX60 YOR394C-AYOR394C-A 168 nt3.07□□□□□ -1.92
TY1A-PR2P0CX60 snR53snR53 91 nt3.07□□□□□ -1.92
TY1A-PR2P0CX60 ENV11YGR071C 2583 nt3.07□□□□□ -1.92
TY1A-PR2P0CX60 YGR027W-BYGR027W-B 5268 nt3.07□□□□□ -1.92
TY1A-PR2P0CX60 YLR227W-BYLR227W-B 5268 nt3.07□□□□□ -1.92
TY1A-PR2P0CX60 YPR158C-DYPR158C-D 5268 nt3.07□□□□□ -1.92
TY1A-PR2P0CX60 REC8YPR007C 2043 nt3.07□□□□□ -1.92
TY1A-PR2P0CX60 PDR8YLR266C 2106 nt3.07□□□□□ -1.92
TY1A-PR2P0CX60 RPN1YHR027C 2982 nt3.06□□□□□ -1.92
TY1A-PR2P0CX60 ISW1YBR245C 3390 nt3.06□□□□□ -1.92
TY1A-PR2P0CX60 ATG11YPR049C 3537 nt3.06□□□□□ -1.92
TY1A-PR2P0CX60 ECM21YBL101C 3354 nt3.06□□□□□ -1.92
TY1A-PR2P0CX60 SPC105YGL093W 2754 nt3.06□□□□□ -1.92
TY1A-PR2P0CX60 MAK10YEL053C 2202 nt3.05□□□□□ -1.92
TY1A-PR2P0CX60 RPO41YFL036W 4056 nt3.04□□□□□ -1.92
TY1A-PR2P0CX60 URA2YJL130C 6645 nt3.04□□□□□ -1.92
TY1A-PR2P0CX60 RRP5YMR229C 5190 nt3.03□□□□□ -1.92
TY1A-PR2P0CX60 YPR108W-AYPR108W-A 213 nt3.03□□□□□ -1.92
TY1A-PR2P0CX60 SMC6YLR383W 3345 nt3.02□□□□□ -1.93
TY1A-PR2P0CX60 UBP1YDL122W 2430 nt3.02□□□□□ -1.93
TY1A-PR2P0CX60 ARO80YDR421W 2853 nt3.02□□□□□ -1.93
Retrieved 100 of 7,029 protein–RNA pairs in 37.5 ms