Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
MMP2P08253 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MMP2P08253 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
MMP2P08253 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
MMP2P08253 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.36■□□□□ 0.85
MMP2P08253 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.36■□□□□ 0.85
MMP2P08253 AC073210.2-201ENST00000430369 194 ntBASIC20.36■□□□□ 0.85
MMP2P08253 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
MMP2P08253 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
MMP2P08253 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
MMP2P08253 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.36■□□□□ 0.85
MMP2P08253 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
MMP2P08253 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.36■□□□□ 0.85
MMP2P08253 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.36■□□□□ 0.85
MMP2P08253 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MMP2P08253 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.35■□□□□ 0.85
MMP2P08253 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
MMP2P08253 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.35■□□□□ 0.85
MMP2P08253 AC069152.1-201ENST00000438030 544 ntBASIC20.35■□□□□ 0.85
MMP2P08253 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.35■□□□□ 0.85
MMP2P08253 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.35■□□□□ 0.85
MMP2P08253 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MMP2P08253 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MMP2P08253 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MMP2P08253 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
MMP2P08253 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
MMP2P08253 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MMP2P08253 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
MMP2P08253 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
MMP2P08253 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MMP2P08253 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
MMP2P08253 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MMP2P08253 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.35■□□□□ 0.85
MMP2P08253 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.35■□□□□ 0.85
MMP2P08253 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.35■□□□□ 0.85
MMP2P08253 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MMP2P08253 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MMP2P08253 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MMP2P08253 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
MMP2P08253 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
MMP2P08253 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MMP2P08253 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
MMP2P08253 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MMP2P08253 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
MMP2P08253 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
MMP2P08253 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
MMP2P08253 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MMP2P08253 AL355802.2-201ENST00000402069 882 ntBASIC20.34■□□□□ 0.85
MMP2P08253 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
MMP2P08253 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.34■□□□□ 0.85
MMP2P08253 AC083880.1-201ENST00000608266 535 ntBASIC20.34■□□□□ 0.85
MMP2P08253 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
MMP2P08253 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
MMP2P08253 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
MMP2P08253 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
MMP2P08253 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
MMP2P08253 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
MMP2P08253 AC112907.3-201ENST00000577781 2400 ntBASIC20.33■□□□□ 0.85
MMP2P08253 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.85
MMP2P08253 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
MMP2P08253 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
MMP2P08253 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
MMP2P08253 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.33■□□□□ 0.85
MMP2P08253 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.33■□□□□ 0.85
MMP2P08253 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.85
MMP2P08253 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.84
MMP2P08253 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
MMP2P08253 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
MMP2P08253 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
MMP2P08253 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
MMP2P08253 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MMP2P08253 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
MMP2P08253 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.32■□□□□ 0.84
MMP2P08253 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.32■□□□□ 0.84
MMP2P08253 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
MMP2P08253 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MMP2P08253 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MMP2P08253 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
MMP2P08253 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MMP2P08253 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MMP2P08253 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MMP2P08253 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MMP2P08253 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.32■□□□□ 0.84
MMP2P08253 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.32■□□□□ 0.84
MMP2P08253 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.32■□□□□ 0.84
MMP2P08253 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.32■□□□□ 0.84
MMP2P08253 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.32■□□□□ 0.84
MMP2P08253 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MMP2P08253 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MMP2P08253 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
MMP2P08253 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
MMP2P08253 BX119927.1-201ENST00000636596 1552 ntBASIC20.32■□□□□ 0.84
MMP2P08253 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
MMP2P08253 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.32■□□□□ 0.84
MMP2P08253 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
MMP2P08253 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
MMP2P08253 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
MMP2P08253 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
MMP2P08253 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
MMP2P08253 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms