Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 MIR4497-201ENST00000583208 89 ntBASIC23.86■■□□□ 1.41
HLA-DOAP06340 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
HLA-DOAP06340 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
HLA-DOAP06340 AF106564.1-201ENST00000607058 2553 ntBASIC23.86■■□□□ 1.41
HLA-DOAP06340 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
HLA-DOAP06340 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
HLA-DOAP06340 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC23.85■■□□□ 1.41
HLA-DOAP06340 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
HLA-DOAP06340 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
HLA-DOAP06340 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
HLA-DOAP06340 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC23.85■■□□□ 1.41
HLA-DOAP06340 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
HLA-DOAP06340 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC23.85■■□□□ 1.41
HLA-DOAP06340 AL121829.2-201ENST00000620908 328 ntBASIC23.85■■□□□ 1.41
HLA-DOAP06340 PKD1P6-201ENST00000343738 4769 ntBASIC23.85■■□□□ 1.41
HLA-DOAP06340 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
HLA-DOAP06340 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
HLA-DOAP06340 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
HLA-DOAP06340 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
HLA-DOAP06340 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
HLA-DOAP06340 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
HLA-DOAP06340 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
HLA-DOAP06340 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
HLA-DOAP06340 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC23.84■■□□□ 1.41
HLA-DOAP06340 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC23.84■■□□□ 1.41
HLA-DOAP06340 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC23.84■■□□□ 1.41
HLA-DOAP06340 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
HLA-DOAP06340 HLA-G-202ENST00000376815 851 ntBASIC23.84■■□□□ 1.41
HLA-DOAP06340 HLA-G-203ENST00000376818 1127 ntBASIC23.84■■□□□ 1.41
HLA-DOAP06340 AC012618.2-201ENST00000428058 849 ntBASIC23.84■■□□□ 1.41
HLA-DOAP06340 TK2-204ENST00000525974 1178 ntTSL 2 BASIC23.84■■□□□ 1.41
HLA-DOAP06340 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
HLA-DOAP06340 AC079834.2-201ENST00000609776 1949 ntBASIC23.84■■□□□ 1.41
HLA-DOAP06340 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
HLA-DOAP06340 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
HLA-DOAP06340 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
HLA-DOAP06340 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC23.84■■□□□ 1.41
HLA-DOAP06340 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC23.84■■□□□ 1.41
HLA-DOAP06340 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC23.84■■□□□ 1.41
HLA-DOAP06340 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC23.83■■□□□ 1.41
HLA-DOAP06340 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
HLA-DOAP06340 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
HLA-DOAP06340 MDFI-202ENST00000373050 809 ntTSL 2 BASIC23.83■■□□□ 1.41
HLA-DOAP06340 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
HLA-DOAP06340 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC23.83■■□□□ 1.41
HLA-DOAP06340 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC23.83■■□□□ 1.41
HLA-DOAP06340 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC23.83■■□□□ 1.41
HLA-DOAP06340 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
HLA-DOAP06340 MAX-217ENST00000557277 728 ntTSL 3 BASIC23.83■■□□□ 1.41
HLA-DOAP06340 ARL16-209ENST00000573715 763 ntTSL 3 BASIC23.83■■□□□ 1.41
HLA-DOAP06340 ARL16-211ENST00000576135 694 ntTSL 3 BASIC23.83■■□□□ 1.41
HLA-DOAP06340 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC23.83■■□□□ 1.41
HLA-DOAP06340 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC23.83■■□□□ 1.41
HLA-DOAP06340 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC23.83■■□□□ 1.41
HLA-DOAP06340 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
HLA-DOAP06340 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
HLA-DOAP06340 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
HLA-DOAP06340 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
HLA-DOAP06340 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC23.83■■□□□ 1.4
HLA-DOAP06340 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
HLA-DOAP06340 LINC00565-201ENST00000562710 2331 ntBASIC23.82■■□□□ 1.4
HLA-DOAP06340 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
HLA-DOAP06340 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
HLA-DOAP06340 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
HLA-DOAP06340 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
HLA-DOAP06340 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
HLA-DOAP06340 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
HLA-DOAP06340 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
HLA-DOAP06340 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC23.82■■□□□ 1.4
HLA-DOAP06340 SNORA78-201ENST00000459373 127 ntBASIC23.82■■□□□ 1.4
HLA-DOAP06340 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC23.82■■□□□ 1.4
HLA-DOAP06340 CABP2-204ENST00000636477 941 ntTSL 5 BASIC23.82■■□□□ 1.4
HLA-DOAP06340 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
HLA-DOAP06340 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
HLA-DOAP06340 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
HLA-DOAP06340 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
HLA-DOAP06340 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
HLA-DOAP06340 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
HLA-DOAP06340 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
HLA-DOAP06340 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
HLA-DOAP06340 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
HLA-DOAP06340 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
HLA-DOAP06340 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
HLA-DOAP06340 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
HLA-DOAP06340 RPS2P55-201ENST00000397318 883 ntBASIC23.81■■□□□ 1.4
HLA-DOAP06340 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
HLA-DOAP06340 AC107956.1-201ENST00000494359 873 ntBASIC23.81■■□□□ 1.4
HLA-DOAP06340 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
HLA-DOAP06340 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC23.81■■□□□ 1.4
HLA-DOAP06340 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC23.81■■□□□ 1.4
HLA-DOAP06340 AC233702.5-201ENST00000584107 538 ntBASIC23.81■■□□□ 1.4
HLA-DOAP06340 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
HLA-DOAP06340 AL121603.2-201ENST00000557373 2117 ntBASIC23.81■■□□□ 1.4
HLA-DOAP06340 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC23.81■■□□□ 1.4
HLA-DOAP06340 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC23.81■■□□□ 1.4
HLA-DOAP06340 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC23.81■■□□□ 1.4
HLA-DOAP06340 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC23.81■■□□□ 1.4
HLA-DOAP06340 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
HLA-DOAP06340 AC124283.5-201ENST00000624661 1809 ntBASIC23.8■■□□□ 1.4
HLA-DOAP06340 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms