Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CHGBP05060 AC006557.6-201ENST00000623071 864 ntBASIC24.33■■□□□ 1.49
CHGBP05060 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
CHGBP05060 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
CHGBP05060 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC24.33■■□□□ 1.48
CHGBP05060 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC24.32■■□□□ 1.48
CHGBP05060 CRK-204ENST00000574295 1391 ntTSL 5 BASIC24.32■■□□□ 1.48
CHGBP05060 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CHGBP05060 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC24.32■■□□□ 1.48
CHGBP05060 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CHGBP05060 GAS7-202ENST00000396115 929 ntTSL 5 BASIC24.32■■□□□ 1.48
CHGBP05060 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
CHGBP05060 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC24.32■■□□□ 1.48
CHGBP05060 UNC93B5-201ENST00000530315 699 ntBASIC24.32■■□□□ 1.48
CHGBP05060 AC060766.5-201ENST00000590539 871 ntBASIC24.32■■□□□ 1.48
CHGBP05060 BRWD1-AS2-201ENST00000603064 1028 ntBASIC24.32■■□□□ 1.48
CHGBP05060 HLA-B-256ENST00000639848 1089 ntBASIC24.32■■□□□ 1.48
CHGBP05060 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CHGBP05060 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CHGBP05060 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CHGBP05060 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC24.32■■□□□ 1.48
CHGBP05060 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC24.32■■□□□ 1.48
CHGBP05060 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
CHGBP05060 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
CHGBP05060 AC112907.3-201ENST00000577781 2400 ntBASIC24.31■■□□□ 1.48
CHGBP05060 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC24.31■■□□□ 1.48
CHGBP05060 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
CHGBP05060 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC24.31■■□□□ 1.48
CHGBP05060 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC24.31■■□□□ 1.48
CHGBP05060 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC24.31■■□□□ 1.48
CHGBP05060 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC24.31■■□□□ 1.48
CHGBP05060 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC24.31■■□□□ 1.48
CHGBP05060 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
CHGBP05060 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC24.31■■□□□ 1.48
CHGBP05060 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
CHGBP05060 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
CHGBP05060 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC24.3■■□□□ 1.48
CHGBP05060 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC24.3■■□□□ 1.48
CHGBP05060 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC24.3■■□□□ 1.48
CHGBP05060 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CHGBP05060 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
CHGBP05060 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CHGBP05060 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC24.3■■□□□ 1.48
CHGBP05060 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CHGBP05060 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
CHGBP05060 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CHGBP05060 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
CHGBP05060 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
CHGBP05060 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC24.29■■□□□ 1.48
CHGBP05060 HES2-205ENST00000487437 968 ntTSL 3 BASIC24.29■■□□□ 1.48
CHGBP05060 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC24.29■■□□□ 1.48
CHGBP05060 AC233263.1-201ENST00000578059 224 ntBASIC24.29■■□□□ 1.48
CHGBP05060 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC24.29■■□□□ 1.48
CHGBP05060 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
CHGBP05060 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CHGBP05060 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC24.29■■□□□ 1.48
CHGBP05060 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CHGBP05060 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
CHGBP05060 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
CHGBP05060 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC24.28■■□□□ 1.48
CHGBP05060 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
CHGBP05060 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC24.28■■□□□ 1.48
CHGBP05060 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CHGBP05060 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CHGBP05060 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CHGBP05060 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
CHGBP05060 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC24.28■■□□□ 1.48
CHGBP05060 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
CHGBP05060 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC24.28■■□□□ 1.48
CHGBP05060 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
CHGBP05060 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CHGBP05060 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CHGBP05060 PCDHAC2-203ENST00000615316 3011 ntBASIC24.28■■□□□ 1.48
CHGBP05060 AC124283.5-201ENST00000624661 1809 ntBASIC24.28■■□□□ 1.48
CHGBP05060 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC24.28■■□□□ 1.48
CHGBP05060 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
CHGBP05060 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
CHGBP05060 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CHGBP05060 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
CHGBP05060 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CHGBP05060 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CHGBP05060 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
CHGBP05060 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
CHGBP05060 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC24.27■■□□□ 1.48
CHGBP05060 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC24.27■■□□□ 1.48
CHGBP05060 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CHGBP05060 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CHGBP05060 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
CHGBP05060 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CHGBP05060 ESRRAP1-201ENST00000400596 1257 ntBASIC24.27■■□□□ 1.48
CHGBP05060 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
CHGBP05060 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
CHGBP05060 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
CHGBP05060 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
CHGBP05060 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
CHGBP05060 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
CHGBP05060 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CHGBP05060 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CHGBP05060 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CHGBP05060 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC24.26■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms