Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.44■□□□□ 0.54
P04436 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.44■□□□□ 0.54
P04436 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
P04436 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
P04436 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.44■□□□□ 0.54
P04436 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.44■□□□□ 0.54
P04436 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
P04436 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.44■□□□□ 0.54
P04436 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.44■□□□□ 0.54
P04436 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
P04436 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
P04436 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.44■□□□□ 0.54
P04436 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.44■□□□□ 0.54
P04436 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
P04436 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.44■□□□□ 0.54
P04436 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
P04436 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
P04436 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
P04436 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.43■□□□□ 0.54
P04436 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
P04436 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
P04436 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
P04436 AL121603.2-201ENST00000557373 2117 ntBASIC18.43■□□□□ 0.54
P04436 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.43■□□□□ 0.54
P04436 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
P04436 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
P04436 POM121L13P-201ENST00000422362 380 ntBASIC18.43■□□□□ 0.54
P04436 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.43■□□□□ 0.54
P04436 AC023632.3-201ENST00000521633 145 ntBASIC18.43■□□□□ 0.54
P04436 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.43■□□□□ 0.54
P04436 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.43■□□□□ 0.54
P04436 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.43■□□□□ 0.54
P04436 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
P04436 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.43■□□□□ 0.54
P04436 AC007225.1-201ENST00000566331 1836 ntBASIC18.43■□□□□ 0.54
P04436 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
P04436 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
P04436 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
P04436 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
P04436 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
P04436 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.42■□□□□ 0.54
P04436 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
P04436 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
P04436 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.42■□□□□ 0.54
P04436 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
P04436 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
P04436 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
P04436 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.42■□□□□ 0.54
P04436 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
P04436 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
P04436 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
P04436 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
P04436 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
P04436 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
P04436 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
P04436 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.42■□□□□ 0.54
P04436 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
P04436 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
P04436 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
P04436 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
P04436 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
P04436 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.41■□□□□ 0.54
P04436 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
P04436 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
P04436 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
P04436 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
P04436 HLA-G-202ENST00000376815 851 ntBASIC18.41■□□□□ 0.54
P04436 HLA-G-203ENST00000376818 1127 ntBASIC18.41■□□□□ 0.54
P04436 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
P04436 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
P04436 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
P04436 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.41■□□□□ 0.54
P04436 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.41■□□□□ 0.54
P04436 AC142381.4-202ENST00000563973 229 ntBASIC18.41■□□□□ 0.54
P04436 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.41■□□□□ 0.54
P04436 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.41■□□□□ 0.54
P04436 AC120498.8-201ENST00000614275 531 ntBASIC18.41■□□□□ 0.54
P04436 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.41■□□□□ 0.54
P04436 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
P04436 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
P04436 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
P04436 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
P04436 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
P04436 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
P04436 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.4■□□□□ 0.54
P04436 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.4■□□□□ 0.54
P04436 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
P04436 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC18.4■□□□□ 0.54
P04436 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
P04436 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
P04436 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
P04436 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
P04436 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
P04436 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
P04436 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
P04436 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.4■□□□□ 0.54
P04436 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
P04436 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
P04436 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.4■□□□□ 0.54
P04436 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms