Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 KRT8P36-201ENST00000489121 1440 ntBASIC21.97■■□□□ 1.11
TIMP1P01033 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
TIMP1P01033 LGALS8-AS1-201ENST00000487567 1457 ntBASIC21.97■■□□□ 1.11
TIMP1P01033 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
TIMP1P01033 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.97■■□□□ 1.11
TIMP1P01033 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
TIMP1P01033 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
TIMP1P01033 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
TIMP1P01033 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
TIMP1P01033 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC21.97■■□□□ 1.11
TIMP1P01033 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TIMP1P01033 USF2-205ENST00000594064 1179 ntTSL 2 BASIC21.97■■□□□ 1.11
TIMP1P01033 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC21.97■■□□□ 1.11
TIMP1P01033 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC21.97■■□□□ 1.11
TIMP1P01033 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
TIMP1P01033 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC21.97■■□□□ 1.11
TIMP1P01033 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.97■■□□□ 1.11
TIMP1P01033 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
TIMP1P01033 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TIMP1P01033 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TIMP1P01033 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TIMP1P01033 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TIMP1P01033 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TIMP1P01033 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC21.96■■□□□ 1.11
TIMP1P01033 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC21.96■■□□□ 1.11
TIMP1P01033 GRAMD4P8-201ENST00000605465 1115 ntBASIC21.96■■□□□ 1.11
TIMP1P01033 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.96■■□□□ 1.11
TIMP1P01033 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
TIMP1P01033 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
TIMP1P01033 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC21.95■■□□□ 1.11
TIMP1P01033 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
TIMP1P01033 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.95■■□□□ 1.1
TIMP1P01033 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TIMP1P01033 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TIMP1P01033 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TIMP1P01033 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
TIMP1P01033 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
TIMP1P01033 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
TIMP1P01033 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC21.95■■□□□ 1.1
TIMP1P01033 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC21.95■■□□□ 1.1
TIMP1P01033 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TIMP1P01033 C2orf69P3-201ENST00000565542 1120 ntBASIC21.95■■□□□ 1.1
TIMP1P01033 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TIMP1P01033 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC21.95■■□□□ 1.1
TIMP1P01033 AL031985.4-201ENST00000642138 673 ntBASIC21.95■■□□□ 1.1
TIMP1P01033 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.95■■□□□ 1.1
TIMP1P01033 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TIMP1P01033 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TIMP1P01033 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TIMP1P01033 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TIMP1P01033 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
TIMP1P01033 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TIMP1P01033 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.94■■□□□ 1.1
TIMP1P01033 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TIMP1P01033 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TIMP1P01033 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC21.94■■□□□ 1.1
TIMP1P01033 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC21.94■■□□□ 1.1
TIMP1P01033 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC21.94■■□□□ 1.1
TIMP1P01033 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
TIMP1P01033 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TIMP1P01033 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
TIMP1P01033 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
TIMP1P01033 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
TIMP1P01033 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.93■■□□□ 1.1
TIMP1P01033 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TIMP1P01033 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TIMP1P01033 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
TIMP1P01033 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
TIMP1P01033 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC21.93■■□□□ 1.1
TIMP1P01033 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC21.93■■□□□ 1.1
TIMP1P01033 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.93■■□□□ 1.1
TIMP1P01033 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TIMP1P01033 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC21.93■■□□□ 1.1
TIMP1P01033 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC21.93■■□□□ 1.1
TIMP1P01033 EGLN1P1-201ENST00000531623 762 ntBASIC21.93■■□□□ 1.1
TIMP1P01033 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.93■■□□□ 1.1
TIMP1P01033 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC21.93■■□□□ 1.1
TIMP1P01033 FSCN1P1-201ENST00000568912 1481 ntBASIC21.93■■□□□ 1.1
TIMP1P01033 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC21.93■■□□□ 1.1
TIMP1P01033 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.92■■□□□ 1.1
TIMP1P01033 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TIMP1P01033 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TIMP1P01033 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.92■■□□□ 1.1
TIMP1P01033 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
TIMP1P01033 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TIMP1P01033 AC027702.1-201ENST00000563810 1770 ntBASIC21.92■■□□□ 1.1
TIMP1P01033 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
TIMP1P01033 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
TIMP1P01033 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC21.92■■□□□ 1.1
TIMP1P01033 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
TIMP1P01033 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TIMP1P01033 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
TIMP1P01033 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC21.92■■□□□ 1.1
TIMP1P01033 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC21.92■■□□□ 1.1
TIMP1P01033 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.92■■□□□ 1.1
TIMP1P01033 GUK1-204ENST00000366721 689 ntTSL 3 BASIC21.92■■□□□ 1.1
TIMP1P01033 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TIMP1P01033 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC21.92■■□□□ 1.1
TIMP1P01033 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
TIMP1P01033 ECEL1P2-202ENST00000465689 757 ntBASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms