Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.65■□□□□ 0.9
CLDN11O75508 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLDN11O75508 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.65■□□□□ 0.9
CLDN11O75508 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLDN11O75508 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CLDN11O75508 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.9
CLDN11O75508 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
CLDN11O75508 DPP3P2-201ENST00000416030 1696 ntBASIC20.64■□□□□ 0.9
CLDN11O75508 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.64■□□□□ 0.89
CLDN11O75508 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLDN11O75508 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLDN11O75508 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.64■□□□□ 0.89
CLDN11O75508 HLA-G-202ENST00000376815 851 ntBASIC20.64■□□□□ 0.89
CLDN11O75508 HLA-G-203ENST00000376818 1127 ntBASIC20.64■□□□□ 0.89
CLDN11O75508 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.64■□□□□ 0.89
CLDN11O75508 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CLDN11O75508 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CLDN11O75508 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CLDN11O75508 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.64■□□□□ 0.89
CLDN11O75508 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
CLDN11O75508 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.64■□□□□ 0.89
CLDN11O75508 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.64■□□□□ 0.89
CLDN11O75508 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLDN11O75508 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLDN11O75508 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.63■□□□□ 0.89
CLDN11O75508 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLDN11O75508 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
CLDN11O75508 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLDN11O75508 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLDN11O75508 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.63■□□□□ 0.89
CLDN11O75508 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.63■□□□□ 0.89
CLDN11O75508 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.63■□□□□ 0.89
CLDN11O75508 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLDN11O75508 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLDN11O75508 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLDN11O75508 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLDN11O75508 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CLDN11O75508 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CLDN11O75508 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CLDN11O75508 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.62■□□□□ 0.89
CLDN11O75508 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.62■□□□□ 0.89
CLDN11O75508 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.62■□□□□ 0.89
CLDN11O75508 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.62■□□□□ 0.89
CLDN11O75508 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.62■□□□□ 0.89
CLDN11O75508 AL031963.3-201ENST00000606441 850 ntBASIC20.62■□□□□ 0.89
CLDN11O75508 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.62■□□□□ 0.89
CLDN11O75508 AC006557.6-201ENST00000623071 864 ntBASIC20.62■□□□□ 0.89
CLDN11O75508 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLDN11O75508 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLDN11O75508 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.62■□□□□ 0.89
CLDN11O75508 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.62■□□□□ 0.89
CLDN11O75508 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.62■□□□□ 0.89
CLDN11O75508 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.62■□□□□ 0.89
CLDN11O75508 KRT8P20-201ENST00000423953 1409 ntBASIC20.61■□□□□ 0.89
CLDN11O75508 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.61■□□□□ 0.89
CLDN11O75508 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CLDN11O75508 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.61■□□□□ 0.89
CLDN11O75508 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
CLDN11O75508 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLDN11O75508 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLDN11O75508 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLDN11O75508 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLDN11O75508 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLDN11O75508 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.61■□□□□ 0.89
CLDN11O75508 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CLDN11O75508 AC008687.6-201ENST00000596318 630 ntBASIC20.61■□□□□ 0.89
CLDN11O75508 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.61■□□□□ 0.89
CLDN11O75508 ITM2C-210ENST00000620962 501 ntBASIC20.61■□□□□ 0.89
CLDN11O75508 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.61■□□□□ 0.89
CLDN11O75508 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CLDN11O75508 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CLDN11O75508 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLDN11O75508 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CLDN11O75508 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLDN11O75508 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLDN11O75508 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLDN11O75508 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.61■□□□□ 0.89
CLDN11O75508 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.61■□□□□ 0.89
CLDN11O75508 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLDN11O75508 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLDN11O75508 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CLDN11O75508 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLDN11O75508 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.6■□□□□ 0.89
CLDN11O75508 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CLDN11O75508 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.6■□□□□ 0.89
CLDN11O75508 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CLDN11O75508 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLDN11O75508 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CLDN11O75508 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLDN11O75508 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CLDN11O75508 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLDN11O75508 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CLDN11O75508 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CLDN11O75508 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CLDN11O75508 AC006058.3-201ENST00000606217 1069 ntBASIC20.6■□□□□ 0.89
CLDN11O75508 AC120498.8-201ENST00000614275 531 ntBASIC20.6■□□□□ 0.89
CLDN11O75508 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CLDN11O75508 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLDN11O75508 KRT8P17-201ENST00000453110 1448 ntBASIC20.6■□□□□ 0.89
CLDN11O75508 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms