Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
GPC4O75487 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
GPC4O75487 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
GPC4O75487 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.15■□□□□ 0.82
GPC4O75487 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
GPC4O75487 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
GPC4O75487 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
GPC4O75487 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
GPC4O75487 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.15■□□□□ 0.82
GPC4O75487 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.15■□□□□ 0.82
GPC4O75487 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
GPC4O75487 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.15■□□□□ 0.82
GPC4O75487 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
GPC4O75487 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
GPC4O75487 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
GPC4O75487 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
GPC4O75487 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
GPC4O75487 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
GPC4O75487 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
GPC4O75487 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.15■□□□□ 0.82
GPC4O75487 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
GPC4O75487 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
GPC4O75487 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
GPC4O75487 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
GPC4O75487 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
GPC4O75487 AL391422.3-201ENST00000603791 2761 ntBASIC20.15■□□□□ 0.82
GPC4O75487 PCDHAC2-203ENST00000615316 3011 ntBASIC20.15■□□□□ 0.82
GPC4O75487 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
GPC4O75487 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
GPC4O75487 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
GPC4O75487 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
GPC4O75487 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
GPC4O75487 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.14■□□□□ 0.81
GPC4O75487 AC007225.1-201ENST00000566331 1836 ntBASIC20.14■□□□□ 0.81
GPC4O75487 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.14■□□□□ 0.81
GPC4O75487 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
GPC4O75487 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
GPC4O75487 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.14■□□□□ 0.81
GPC4O75487 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
GPC4O75487 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
GPC4O75487 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.14■□□□□ 0.81
GPC4O75487 AC026185.1-201ENST00000445748 174 ntBASIC20.14■□□□□ 0.81
GPC4O75487 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
GPC4O75487 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
GPC4O75487 RARRES2P4-201ENST00000514074 484 ntBASIC20.14■□□□□ 0.81
GPC4O75487 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.14■□□□□ 0.81
GPC4O75487 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.14■□□□□ 0.81
GPC4O75487 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
GPC4O75487 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
GPC4O75487 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
GPC4O75487 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
GPC4O75487 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.14■□□□□ 0.81
GPC4O75487 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.13■□□□□ 0.81
GPC4O75487 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
GPC4O75487 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.13■□□□□ 0.81
GPC4O75487 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
GPC4O75487 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
GPC4O75487 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
GPC4O75487 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
GPC4O75487 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
GPC4O75487 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
GPC4O75487 CYP2T1P-201ENST00000432607 1285 ntBASIC20.13■□□□□ 0.81
GPC4O75487 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.13■□□□□ 0.81
GPC4O75487 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.13■□□□□ 0.81
GPC4O75487 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.13■□□□□ 0.81
GPC4O75487 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
GPC4O75487 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.13■□□□□ 0.81
GPC4O75487 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.13■□□□□ 0.81
GPC4O75487 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.13■□□□□ 0.81
GPC4O75487 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
GPC4O75487 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
GPC4O75487 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.13■□□□□ 0.81
GPC4O75487 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
GPC4O75487 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
GPC4O75487 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
GPC4O75487 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
GPC4O75487 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
GPC4O75487 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
GPC4O75487 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.12■□□□□ 0.81
GPC4O75487 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
GPC4O75487 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
GPC4O75487 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
GPC4O75487 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.12■□□□□ 0.81
GPC4O75487 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
GPC4O75487 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.12■□□□□ 0.81
GPC4O75487 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
GPC4O75487 AC005181.1-201ENST00000604782 1256 ntBASIC20.12■□□□□ 0.81
GPC4O75487 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
GPC4O75487 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
GPC4O75487 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.12■□□□□ 0.81
GPC4O75487 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
GPC4O75487 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
GPC4O75487 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.12■□□□□ 0.81
GPC4O75487 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
GPC4O75487 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
GPC4O75487 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
GPC4O75487 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
GPC4O75487 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
GPC4O75487 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
GPC4O75487 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms