Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MSI1O43347 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MSI1O43347 DPP3P2-201ENST00000416030 1696 ntBASIC20.96■□□□□ 0.95
MSI1O43347 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.96■□□□□ 0.95
MSI1O43347 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MSI1O43347 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
MSI1O43347 AC073314.1-201ENST00000568729 2216 ntBASIC20.96■□□□□ 0.95
MSI1O43347 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
MSI1O43347 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.96■□□□□ 0.95
MSI1O43347 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
MSI1O43347 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.96■□□□□ 0.95
MSI1O43347 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.96■□□□□ 0.95
MSI1O43347 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
MSI1O43347 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.96■□□□□ 0.95
MSI1O43347 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.96■□□□□ 0.95
MSI1O43347 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MSI1O43347 AC008403.3-201ENST00000598924 454 ntBASIC20.96■□□□□ 0.95
MSI1O43347 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.96■□□□□ 0.95
MSI1O43347 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
MSI1O43347 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
MSI1O43347 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.96■□□□□ 0.95
MSI1O43347 PTBP1P-201ENST00000554374 1601 ntBASIC20.96■□□□□ 0.95
MSI1O43347 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MSI1O43347 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
MSI1O43347 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.95■□□□□ 0.94
MSI1O43347 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.95■□□□□ 0.94
MSI1O43347 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
MSI1O43347 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
MSI1O43347 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.95■□□□□ 0.94
MSI1O43347 AC026366.1-201ENST00000488803 879 ntBASIC20.95■□□□□ 0.94
MSI1O43347 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
MSI1O43347 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.95■□□□□ 0.94
MSI1O43347 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.95■□□□□ 0.94
MSI1O43347 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MSI1O43347 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MSI1O43347 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
MSI1O43347 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MSI1O43347 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
MSI1O43347 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MSI1O43347 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MSI1O43347 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
MSI1O43347 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MSI1O43347 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
MSI1O43347 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.94■□□□□ 0.94
MSI1O43347 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.94■□□□□ 0.94
MSI1O43347 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MSI1O43347 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MSI1O43347 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
MSI1O43347 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
MSI1O43347 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.94■□□□□ 0.94
MSI1O43347 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MSI1O43347 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
MSI1O43347 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
MSI1O43347 UNC93B4-201ENST00000505679 747 ntBASIC20.94■□□□□ 0.94
MSI1O43347 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.94■□□□□ 0.94
MSI1O43347 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.94■□□□□ 0.94
MSI1O43347 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
MSI1O43347 AC005829.2-201ENST00000571422 1056 ntBASIC20.94■□□□□ 0.94
MSI1O43347 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
MSI1O43347 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MSI1O43347 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
MSI1O43347 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
MSI1O43347 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
MSI1O43347 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MSI1O43347 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
MSI1O43347 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.94■□□□□ 0.94
MSI1O43347 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
MSI1O43347 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
MSI1O43347 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MSI1O43347 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
MSI1O43347 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.93■□□□□ 0.94
MSI1O43347 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
MSI1O43347 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
MSI1O43347 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MSI1O43347 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
MSI1O43347 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MSI1O43347 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MSI1O43347 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MSI1O43347 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.93■□□□□ 0.94
MSI1O43347 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
MSI1O43347 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.93■□□□□ 0.94
MSI1O43347 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.93■□□□□ 0.94
MSI1O43347 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.93■□□□□ 0.94
MSI1O43347 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.93■□□□□ 0.94
MSI1O43347 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
MSI1O43347 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
MSI1O43347 SMG8-203ENST00000578922 2178 ntBASIC20.93■□□□□ 0.94
MSI1O43347 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
MSI1O43347 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
MSI1O43347 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
MSI1O43347 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.92■□□□□ 0.94
MSI1O43347 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
MSI1O43347 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
MSI1O43347 AC006058.3-201ENST00000606217 1069 ntBASIC20.92■□□□□ 0.94
MSI1O43347 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.92■□□□□ 0.94
MSI1O43347 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.92■□□□□ 0.94
MSI1O43347 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
MSI1O43347 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.92■□□□□ 0.94
MSI1O43347 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MSI1O43347 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms